Factsheet for Os03t0436400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0351555-01	Rice	cytosol	100.0	100.0
Zm00001d029582_P001	Maize	extracellular	86.11	86.11
TraesCS3D01G514300.1	Wheat	plastid	84.6	85.24
TraesCS3B01G574600.1	Wheat	mitochondrion	83.84	84.48
EER92090	Sorghum	cytosol	84.34	84.34
TraesCS3A01G506600.1	Wheat	mitochondrion	83.08	83.72
TraesCS3A01G506500.1	Wheat	extracellular	56.82	83.03
TraesCS3A01G506400.1	Wheat	extracellular	56.82	83.03
TraesCS3A01G508600.1	Wheat	cytosol	82.32	82.95
TraesCS3D01G514400.1	Wheat	plastid	82.58	82.37
HORVU0Hr1G007340.1	Barley	plastid	82.83	82.21
TraesCS3A01G507400.1	Wheat	golgi	80.81	80.6
TraesCS3B01G575500.1	Wheat	golgi	80.3	80.1
HORVU3Hr1G111650.1	Barley	cytosol, mitochondrion	80.56	78.96
GSMUA_Achr4P16440_001	Banana	cytosol	60.35	69.08
Os07t0601600-00	Rice	plasma membrane	70.96	68.54
Os03t0422600-00	Rice	mitochondrion	44.95	65.2
GSMUA_Achr3P30170_001	Banana	cytosol	56.57	64.55
GSMUA_Achr6P24680_001	Banana	golgi	48.74	64.12
KRH52063	Soybean	nucleus	60.35	61.6
CDY03474	Canola	cytosol	60.1	61.18
Bra013777.1-P	Field mustard	cytosol	60.1	61.03
CDY34267	Canola	cytosol	60.1	61.03
CDY08911	Canola	cytosol	58.84	59.74
Bra010499.1-P	Field mustard	cytosol	58.59	59.49
CDY24831	Canola	cytosol	58.59	59.49
AT4G24220.1	Thale cress	cytosol	58.08	59.28
CDX92623	Canola	cytosol	56.57	58.95
Solyc10g049620.1.1	Tomato	plastid	57.58	58.76
PGSC0003DMT400013949	Potato	cytosol	57.58	58.76
Bra019241.1-P	Field mustard	cytosol	56.06	58.58
CDY10994	Canola	cytosol	55.81	58.31
VIT_18s0001g09420.t01	Wine grape	cytosol	57.32	58.21
VIT_03s0091g00450.t01	Wine grape	cytosol	57.07	58.1
Solyc10g049600.1.1	Tomato	cytosol	55.56	57.14
PGSC0003DMT400025509	Potato	cytosol	55.05	56.19
PGSC0003DMT400039098	Potato	cytosol	54.29	55.41
KRH15431	Soybean	cytosol	9.09	52.94
CDY36344	Canola	extracellular	11.36	52.33
PGSC0003DMT400071398	Potato	cytosol	47.73	47.73
Solyc01g091670.2.1	Tomato	cytosol	46.21	46.68
HORVU3Hr1G055170.1	Barley	mitochondrion	9.6	45.24

Protein Annotations

EMBL:AK106105	EnsemblPlants:Os03t0436400-01	EnsemblPlantsGene:Os03g0436400	EntrezGene:107275612	EntrezGene:4333193	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10	ProteinID:AAU89185.1	ProteinID:AAU89226.1	ProteinID:ABF96808.1
ProteinID:BAF12354.1	ProteinID:BAS84844.1	ProteinID:BAT13749.1	ProteinID:EAZ27443.1	RefSeq:XP_015617799.1	RefSeq:XP_015632878.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI00004444A8	UniProt:Q60DC5	MapMan:35.1	:

Description

Similar to A.thaliana gene induced upon wounding stress. (Os03t0436400-01);Similar to A.thaliana gene induced upon wounding stress. (Os03t0436400-02);Similar to A.thaliana gene induced upon wounding stress. (Os03t0436400-03)

Coordinates

chr3:-:18405282..18406843

Molecular Weight (calculated)

44047.2 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.065

Length

396 amino acids

Sequence
(BLAST)

001: MSWWWAGAIG AVKKRQEENA AATEPSFQSV ALVVGSTGIV GTSLLDILPL QDTPGGPWKV YAVSRRPLPP WSPPASPAVT HLHLDLADSA AVAEVLTPLT
101: DITHVFYVAW SAHPTEAQNR EVNSAMLRNI LSVVVPNCPA LVHVCLQTGR KHYIGPFEVI GKIAAPDPPF TEDMLRLDCP NFYYDLEDVL FNEVSRRDGA
201: VSWSVHRPTV VFGFSPRSAM NVVGSLCVYA AICRKEGAVL RWPGSRVAWE GFSDASDADL IAEHEIWAAV EPFAKNEAFN CSNGDLYKWK LLWPMLADQF
301: GVEWSGYEGE ESSFKLADAM SGKEAVWAEI VKENDLMDTE LEEITNWWFV DAVFGVRSEH LDSMNKSKEH GFLGFRNTVN SFNTWIEKMK VFKIVP

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.