Factsheet for TraesCS3A01G506400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G506500.1	Wheat	extracellular	100.0	100.0
TraesCS3A01G508600.1	Wheat	cytosol	99.26	68.45
TraesCS3D01G514300.1	Wheat	plastid	98.16	67.68
TraesCS3B01G574600.1	Wheat	mitochondrion	94.83	65.39
HORVU0Hr1G007340.1	Barley	plastid	93.36	63.41
TraesCS3A01G506600.1	Wheat	mitochondrion	88.19	60.81
Os11t0351555-01	Rice	cytosol	83.03	56.82
Os03t0436400-01	Rice	plasma membrane	83.03	56.82
TraesCS3A01G507400.1	Wheat	golgi	82.66	56.42
EER92090	Sorghum	cytosol	79.7	54.55
Zm00001d029582_P001	Maize	extracellular	78.97	54.04
KRH15431	Soybean	cytosol	12.92	51.47
GSMUA_Achr3P30170_001	Banana	cytosol	60.52	47.26
GSMUA_Achr4P16440_001	Banana	cytosol	59.04	46.24
CDY36344	Canola	extracellular	14.02	44.19
GSMUA_Achr6P24680_001	Banana	golgi	49.08	44.19
KRH52063	Soybean	nucleus	60.52	42.27
CDY03474	Canola	cytosol	59.04	41.13
CDX92623	Canola	cytosol	57.56	41.05
CDY34267	Canola	cytosol	59.04	41.03
Bra013777.1-P	Field mustard	cytosol	59.04	41.03
CDY10994	Canola	cytosol	57.2	40.9
CDY08911	Canola	cytosol	58.67	40.77
Bra019241.1-P	Field mustard	cytosol	56.83	40.63
VIT_03s0091g00450.t01	Wine grape	cytosol	58.3	40.62
CDY24831	Canola	cytosol	58.3	40.51
Bra010499.1-P	Field mustard	cytosol	58.3	40.51
VIT_18s0001g09420.t01	Wine grape	cytosol	57.56	40.0
AT4G24220.1	Thale cress	cytosol	57.2	39.95
PGSC0003DMT400013949	Potato	cytosol	57.2	39.95
Solyc10g049620.1.1	Tomato	plastid	56.83	39.69
Solyc10g049600.1.1	Tomato	cytosol	53.87	37.92
PGSC0003DMT400025509	Potato	cytosol	53.87	37.63
PGSC0003DMT400039098	Potato	cytosol	52.4	36.6
PGSC0003DMT400071398	Potato	cytosol	46.86	32.07
Solyc01g091670.2.1	Tomato	cytosol	45.76	31.63

Protein Annotations

EnsemblPlants:TraesCS3A01G506400.1	EnsemblPlantsGene:TraesCS3A01G506400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR32487	PANTHER:PTHR32487:SF10
SUPFAM:SSF51735	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:728017424..728018239

Molecular Weight (calculated)

30681.4 Da

IEP (calculated)

4.664

GRAVY (calculated)

-0.192

Length

271 amino acids

Sequence
(BLAST)

001: MLRNVLSVLV PGCPALAHVC LQTGRKHYIG PYEAIGKIPV PDPPYTEDMP RLDYPNFYYD QEDVLFEEVS RRDGAVSWSV HRPSVVFGFS PRSAMNVVAS
101: LSVYAAICRK EGAMLRWPGS RVAWEGFSDA SDADLVAEQE IWAAVDPLAR NEAFNCSNGD LYKWKQLWPM VADRFGVEWA GYEGEDSQFM LADAMAGKEA
201: VWAEILQENE LVTTELQEIA NWWFLDAVFN VKCEHLDSMN KSKEHGFLGF RNTAKSFNAW IDKMKVLKIV P

Best Arabidopsis Sequence Match ( AT4G24220.1 )
(BLAST)

001: MSWWWAGAIG AAKKKLDEDE PSQSFESVAL IIGVTGIVGN SLAEILPLSD TPGGPWKVYG VARRPRPTWN ADHPIDYIQC DVSDAEDTRS KLSPLTDVTH
101: VFYVTWTNRE SESENCEANG SMLRNVLQAI IPYAPNLRHV CLQTGTKHYL GPFTNVDGPR HDPPFTEDMP RLQIQNFYYT QEDILFEEIK KIETVTWSIH
201: RPNMIFGFSP YSLMNIVGTL CVYAAICKHE GSPLLFPGSK KAWEGFMTAS DADLIAEQQI WAAVDPYAKN EAFNCNNADI FKWKHLWKIL AEQFGIEEYG
301: FEEGKNLGLV EMMKGKERVW EEMVKENQLQ EKKLEEVGVW WFADVILGVE GMIDSMNKSK EYGFLGFRNS NNSFISWIDK YKAFKIVP

Arabidopsis Description

VEP13-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.