Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH44167 | Soybean | plasma membrane | 94.38 | 95.45 |
| KRH10001 | Soybean | mitochondrion | 69.1 | 66.85 |
| KRH23330 | Soybean | plastid | 67.98 | 65.76 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 62.36 | 60.99 |
| Solyc03g121460.1.1 | Tomato | plastid | 60.67 | 59.34 |
| VIT_09s0002g02400.t01 | Wine grape | plastid | 62.36 | 57.51 |
| AT1G55190.1 | Thale cress | plasma membrane | 58.99 | 55.56 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 57.87 | 55.08 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 57.3 | 54.55 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 55.62 | 52.66 |
| Bra037983.1-P | Field mustard | extracellular, plasma membrane | 40.45 | 51.43 |
| GSMUA_Achr7P09070_001 | Banana | plastid | 53.93 | 51.06 |
| CDY23634 | Canola | plasma membrane | 51.12 | 50.28 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 53.37 | 50.26 |
| Bra014355.1-P | Field mustard | cytosol, plasma membrane, plastid | 52.81 | 49.74 |
| CDY08228 | Canola | plasma membrane | 52.81 | 49.74 |
| CDY51735 | Canola | plasma membrane | 50.56 | 49.45 |
| CDY37483 | Canola | plasma membrane | 50.56 | 49.45 |
| CDX97509 | Canola | plasma membrane | 50.0 | 49.17 |
| AT3G13710.1 | Thale cress | plasma membrane | 51.69 | 48.94 |
| Bra021504.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 50.0 | 48.9 |
| Bra025954.1-P | Field mustard | plasma membrane | 50.0 | 48.37 |
| AT1G17700.1 | Thale cress | plasma membrane | 48.88 | 48.33 |
| Os05t0200280-01 | Rice | plasma membrane | 52.25 | 48.19 |
| CDY26225 | Canola | plasma membrane | 49.44 | 47.83 |
| CDX81845 | Canola | plasma membrane | 48.31 | 47.51 |
| Bra027406.1-P | Field mustard | plasma membrane | 48.31 | 47.51 |
| TraesCS3B01G122600.1 | Wheat | plastid | 50.0 | 46.84 |
| TraesCS3D01G106500.1 | Wheat | plastid | 50.0 | 46.84 |
| Zm00001d039455_P002 | Maize | extracellular, mitochondrion | 50.56 | 46.63 |
| Bra031001.1-P | Field mustard | plasma membrane | 47.19 | 46.41 |
| TraesCS3A01G104300.1 | Wheat | plastid | 49.44 | 46.07 |
| TraesCS1D01G130300.1 | Wheat | plastid | 49.44 | 46.07 |
| EES00126 | Sorghum | plastid | 49.44 | 45.83 |
| TraesCS1A01G124100.1 | Wheat | plastid | 48.88 | 45.55 |
| TraesCS1B01G143000.1 | Wheat | plastid | 48.88 | 45.31 |
| CDY59501 | Canola | plasma membrane | 46.63 | 45.11 |
| KRH32112 | Soybean | plastid | 44.94 | 43.48 |
| KRH49060 | Soybean | plasma membrane | 48.31 | 43.43 |
| Os01t0196500-01 | Rice | plastid | 48.31 | 42.79 |
| Zm00001d037747_P001 | Maize | plastid | 44.94 | 42.55 |
| KRH74153 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 47.75 | 42.5 |
| KRH71325 | Soybean | plastid | 42.13 | 42.37 |
| KRG92690 | Soybean | plastid | 45.51 | 42.19 |
| OQU77594 | Sorghum | plastid | 46.07 | 41.84 |
| KRH34097 | Soybean | plastid | 44.38 | 41.58 |
| KRH67312 | Soybean | plastid | 44.94 | 39.8 |
| KRG95630 | Soybean | plastid | 44.38 | 39.5 |
| HORVU1Hr1G028520.1 | Barley | plastid | 47.75 | 39.35 |
| KRG93818 | Soybean | extracellular, plasma membrane, vacuole | 17.98 | 38.1 |
| HORVU3Hr1G018940.2 | Barley | plastid | 49.44 | 34.51 |
| KRH34380 | Soybean | cytosol, plastid | 32.58 | 34.32 |
| KRH04803 | Soybean | plastid | 18.54 | 33.67 |
| KRH73238 | Soybean | plastid | 39.33 | 32.56 |
| KRH54835 | Soybean | endoplasmic reticulum, extracellular, vacuole | 19.66 | 32.41 |
| KRH14895 | Soybean | plastid | 38.76 | 32.09 |
| CDY51734 | Canola | plastid | 37.64 | 32.06 |
| Bra021503.1-P | Field mustard | plastid | 37.08 | 31.73 |
| KRH00333 | Soybean | plastid | 40.45 | 31.72 |
| CDY37482 | Canola | plastid | 36.52 | 31.1 |
| CDY55133 | Canola | plasma membrane | 35.96 | 30.05 |
| KRH49465 | Soybean | plastid | 37.64 | 30.04 |
| KRH76033 | Soybean | endoplasmic reticulum | 36.52 | 29.68 |
| KRH65569 | Soybean | plastid | 37.08 | 29.07 |
| Bra021502.1-P | Field mustard | plastid | 34.83 | 28.97 |
| CDY51733 | Canola | plastid | 34.83 | 28.97 |
| KRH32827 | Soybean | plastid | 30.34 | 23.89 |
Protein Annotations
| EMBL:ACUP02004137 | EnsemblPlants:KRH47141 | EnsemblPlantsGene:GLYMA_07G011000 | EntrezGene:100789765 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF2 |
| PFAM:PF03208 | ProteinID:KRH47141 | ProteinID:KRH47141.1 | ProteinID:KRH47142.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002337D8E | UniProt:I1KGD8 | MapMan:22.8.4.3.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:838965..841202
Molecular Weight (calculated)
19765.8 Da
IEP (calculated)
9.801
GRAVY (calculated)
0.732
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTTYGTIPT SPPPNLEYIS RAKQRIKAGL GTRRPWKAMF NFRSLKVPGG GVPEALSRIR INVSYFRMNY AMVTLLILFL SLLWHPISLI VFLVLMAAWL
101: FLYFLRDEPL VVLGHLVDDR LVLLVMALLT VALLLLTDAT VNILVAVAVG VVAVVAHAAF RRTEDLFLGE EEEVASAA
101: FLYFLRDEPL VVLGHLVDDR LVLLVMALLT VALLLLTDAT VNILVAVAVG VVAVVAHAAF RRTEDLFLGE EEEVASAA
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.