Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 7
- nucleus 1
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G09450.1 | KRH30315 | AT2G44950.1 | 21798944 |
| AT5G09450.1 | KRH75261 | AT2G44950.1 | 21798944 |
| AT5G09450.1 | KRH05183 | AT4G32190.1 | 21798944 |
| AT5G09450.1 | KRH15859 | AT4G32190.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43872 | Soybean | mitochondrion | 94.24 | 95.19 |
| VIT_11s0078g00180.t01 | Wine grape | cytosol | 33.33 | 69.63 |
| Solyc10g047370.1.1 | Tomato | mitochondrion | 61.9 | 61.9 |
| PGSC0003DMT400011461 | Potato | mitochondrion | 61.65 | 61.5 |
| AT5G09450.1 | Thale cress | mitochondrion | 59.4 | 57.95 |
| Bra028632.1-P | Field mustard | mitochondrion | 57.89 | 57.18 |
| CDY44801 | Canola | mitochondrion | 57.64 | 56.93 |
| Os04t0450200-01 | Rice | cytosol | 37.59 | 51.37 |
| GSMUA_Achr10P... | Banana | cytosol | 55.39 | 50.11 |
| EES10908 | Sorghum | mitochondrion | 47.62 | 45.78 |
| HORVU3Hr1G070650.1 | Barley | cytosol | 16.54 | 45.52 |
| TraesCS2A01G318100.1 | Wheat | mitochondrion | 47.12 | 44.87 |
| TraesCS2B01G336200.1 | Wheat | mitochondrion | 45.61 | 43.44 |
| Zm00001d003500_P001 | Maize | mitochondrion | 45.86 | 43.26 |
| HORVU1Hr1G085940.2 | Barley | cytosol | 18.05 | 42.35 |
| TraesCS2D01G315700.1 | Wheat | mitochondrion | 46.62 | 42.18 |
| HORVU2Hr1G079080.2 | Barley | cytosol | 28.57 | 41.45 |
| KRH10858 | Soybean | mitochondrion | 29.32 | 24.07 |
| KRH55328 | Soybean | plastid | 27.82 | 22.56 |
| KRH45616 | Soybean | nucleus | 26.32 | 21.43 |
| KRH69203 | Soybean | cytosol | 20.55 | 21.08 |
| KRH31780 | Soybean | mitochondrion | 24.56 | 20.59 |
| KRH52991 | Soybean | mitochondrion | 25.06 | 20.16 |
| KRH48889 | Soybean | plastid | 26.32 | 19.23 |
| KRH26940 | Soybean | cytosol | 23.81 | 19.15 |
| KRH22399 | Soybean | cytosol | 22.81 | 19.12 |
| KRH66454 | Soybean | plastid | 26.07 | 18.74 |
| KRG99413 | Soybean | cytosol, mitochondrion | 16.04 | 18.23 |
| KRH62276 | Soybean | mitochondrion | 24.06 | 16.7 |
| KRH66764 | Soybean | cytosol | 16.79 | 16.14 |
| KRH10262 | Soybean | mitochondrion | 20.3 | 15.98 |
| KRH23068 | Soybean | mitochondrion | 20.05 | 15.78 |
| KRH69049 | Soybean | mitochondrion | 22.06 | 14.45 |
| KRG95098 | Soybean | mitochondrion | 21.8 | 14.26 |
| KRH31614 | Soybean | mitochondrion | 21.05 | 14.0 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100811179 | MapMan:35.1 | EMBL:ACUP02009148 | EnsemblPlantsGene:GLYMA_15G056300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 |
| UniProt:I1MDZ2 | InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlants:KRH10583 | ProteinID:KRH10583 | ProteinID:KRH10583.1 |
| PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF644 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI000233B427 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:4388548..4391116
Molecular Weight (calculated)
45585.7 Da
IEP (calculated)
5.799
GRAVY (calculated)
-0.189
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHRSLFLSL RRFSSCRNSG LACVLNRTRF VSSGAVSSDL VEESVEGDDD LRSRIFRLRL PKRSATNVLQ KWVLQGNPIT LSQLRDISKE LRRSQRYKHA
101: LEISEWMVSN EEYELSDSDY AVRIDLMTQV FGIDAAERYF EGLPLATKTT ETYTALLHSY AGAKLTEKAE ELYQRIKDSN LSFDALTYNE MMTLYMSVGQ
201: FEKVPIVVEE LKQQKVSPDI FTYNLWISSC AAILNIDEVR RILDEMSHGA GSNESWIRYL NLANIYISVA HLDNASSNTL VETEKRITQR QWITYDFLII
301: LYGGLGSKDK LDQIWNSLGM TKQKMISRNY MCIISSYLML GLTKEVGEVI DQWKQSTTTD FDMLACKKIL VAFRDIGLAE IANNLNVILI EKNLSLGSD
101: LEISEWMVSN EEYELSDSDY AVRIDLMTQV FGIDAAERYF EGLPLATKTT ETYTALLHSY AGAKLTEKAE ELYQRIKDSN LSFDALTYNE MMTLYMSVGQ
201: FEKVPIVVEE LKQQKVSPDI FTYNLWISSC AAILNIDEVR RILDEMSHGA GSNESWIRYL NLANIYISVA HLDNASSNTL VETEKRITQR QWITYDFLII
301: LYGGLGSKDK LDQIWNSLGM TKQKMISRNY MCIISSYLML GLTKEVGEVI DQWKQSTTTD FDMLACKKIL VAFRDIGLAE IANNLNVILI EKNLSLGSD
001: MATRSLFHSL RCRLTNNGVL GSNFIRNAES SRFSKSYNAD AAIGNSLVEE SEEKDDLKSR IFRLRLPKRS ATTVLEKWIG EGNQMTINEL REISKELRRT
101: RRYKHALEVT EWMVQHEESK ISDADYASRI DLISKVFGID AAERYFEGLD IDSKTAETYT SLLHAYAASK QTERAEALFK RIIESDSLTF GAITYNEMMT
201: LYMSVGQVEK VPEVIEVLKQ KKVSPDIFTY NLWLSSCAAT FNIDELRKIL EEMRHDASSN EGWVRYIDLT SIYINSSRVT NAESTLPVEA EKSISQREWI
301: TYDFLMILHT GLGNKVMIDQ IWKSLRNTNQ ILSSRSYICV LSSYLMLGHL REAEEIIHQW KESKTTEFDA SACLRILNAF RDVGLEGIAS GFHLILVHNK
401: CSLENEGSS
101: RRYKHALEVT EWMVQHEESK ISDADYASRI DLISKVFGID AAERYFEGLD IDSKTAETYT SLLHAYAASK QTERAEALFK RIIESDSLTF GAITYNEMMT
201: LYMSVGQVEK VPEVIEVLKQ KKVSPDIFTY NLWLSSCAAT FNIDELRKIL EEMRHDASSN EGWVRYIDLT SIYINSSRVT NAESTLPVEA EKSISQREWI
301: TYDFLMILHT GLGNKVMIDQ IWKSLRNTNQ ILSSRSYICV LSSYLMLGHL REAEEIIHQW KESKTTEFDA SACLRILNAF RDVGLEGIAS GFHLILVHNK
401: CSLENEGSS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g09450, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94B59]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.