CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31780	Soybean	mitochondrion	90.49	73.95
VIT_07s0005g01630.t01	Wine grape	mitochondrion	48.59	40.04
PGSC0003DMT400023279	Potato	mitochondrion	47.81	37.58
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	43.7	35.05
Bra000902.1-P	Field mustard	mitochondrion	42.67	33.13
CDX90962	Canola	mitochondrion	42.67	33.13
CDX91822	Canola	mitochondrion	42.42	33.0
AT4G01990.1	Thale cress	mitochondrion	42.16	32.67
Bra033321.1-P	Field mustard	mitochondrion	43.19	32.62
CDX89976	Canola	mitochondrion	42.67	32.23
AT1G02370.1	Thale cress	mitochondrion	44.47	32.22
CDY15237	Canola	mitochondrion	42.42	32.16
KRH45616	Soybean	nucleus	39.85	31.63
KRG99413	Soybean	cytosol, mitochondrion	28.28	31.34
GSMUA_Achr11P...	Banana	mitochondrion	39.59	29.67
TraesCS6B01G118900.1	Wheat	cytosol	31.62	29.57
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	36.25	28.14
Zm00001d009122_P001	Maize	mitochondrion	36.25	27.38
TraesCS6B01G119000.1	Wheat	mitochondrion	33.16	26.93
TraesCS6D01G079100.1	Wheat	mitochondrion	32.9	26.72
TraesCS6A01G091100.1	Wheat	mitochondrion	34.7	26.63
EES02848	Sorghum	mitochondrion	36.25	26.6
Os01t0301000-01	Rice	mitochondrion	35.48	26.44
TraesCS6A01G091200.2	Wheat	cytosol	24.68	26.3
TraesCS2B01G583500.1	Wheat	mitochondrion	32.39	26.25
TraesCS2B01G584000.2	Wheat	mitochondrion	37.28	26.22
TraesCS2A01G552700.1	Wheat	mitochondrion	37.02	26.13
TraesCS6D01G079300.1	Wheat	mitochondrion	34.19	26.13
TraesCS6A01G090900.1	Wheat	mitochondrion	32.13	26.1
TraesCS2D01G553300.1	Wheat	mitochondrion	37.28	25.89
TraesCS6A01G091000.1	Wheat	mitochondrion	33.93	25.88
TraesCS6B01G119100.1	Wheat	mitochondrion	32.65	25.66
TraesCS6A01G090800.2	Wheat	mitochondrion	31.36	25.31
HORVU6Hr1G016360.7	Barley	mitochondrion	32.39	25.2
Os01t0301700-01	Rice	mitochondrion	32.39	25.0
HORVU6Hr1G016390.10	Barley	plastid	34.7	24.28
TraesCS6D01G079200.1	Wheat	plastid	33.68	24.21
Os01t0301500-01	Rice	cytosol, mitochondrion	30.08	24.17
TraesCS2A01G552100.1	Wheat	mitochondrion	33.68	23.82
KRH10858	Soybean	mitochondrion	29.05	23.25
TraesCS2D01G553100.1	Wheat	mitochondrion	32.39	23.12
KRH26940	Soybean	cytosol	29.31	22.98
KRH66454	Soybean	plastid	32.65	22.88
KRH48889	Soybean	plastid	31.88	22.71
KRH22399	Soybean	cytosol	27.51	22.48
KRH55328	Soybean	plastid	27.51	21.75
TraesCS6D01G079400.1	Wheat	plastid	24.94	21.51
KRH10583	Soybean	mitochondrion	21.08	20.55
KRH43872	Soybean	mitochondrion	20.82	20.51
KRH52991	Soybean	mitochondrion	25.71	20.16
KRH66764	Soybean	cytosol	21.34	20.0
KRH62276	Soybean	mitochondrion	25.45	17.22
KRH69049	Soybean	mitochondrion	23.91	15.27
KRH31614	Soybean	mitochondrion	22.36	14.5
KRH23068	Soybean	mitochondrion	18.25	14.0
KRH10262	Soybean	mitochondrion	17.99	13.81
KRG95098	Soybean	mitochondrion	21.34	13.61

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:ACUP02000689	EnsemblPlantsGene:GLYMA_02G011200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	UniProt:I1JBF2
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH69203	ProteinID:KRH69203	ProteinID:KRH69203.1	PFAM:PF01535
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF504	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000296B8B7	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:1057829..1058998

Molecular Weight (calculated)

44877.8 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.380

Length

389 amino acids

Sequence
(BLAST)

001: MRKVNFSWNN YAVQLDLVSK TKGVVAAENF FSGLPPAAKN MYTYGALLNC YCKELMKDKA LSHFDRMNEL GYVTNLAFNN VMTLFMKLGE PEKVAQLVEL
101: MKQRRIPMSA FTYYIWMNSC ASLNDLDGVE RIYEEMKTED EDQIGWQTYS NLASIYVKFK DFEKAEMMLK MLEKQVKPKQ RDAYHCLLGL YAGTGNLGEV
201: HRVWNSLKSV SPVTNFSYLV MLSTLRRLND IEGLTKCFKE WEASCVSYDV RLVSVCVSAH LNQNKLEEAE SVFEEASRRS KGPFFRVREE FMKFFLKKHQ
301: LDAAVRYLEA ALSEVKGGKW RPSPQVLGAF LKYYEEETDV DGVDELSKIL KANNFDDSWI KNHITASELS PEIDPGFKED SRVYHAQEN

Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)

001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.