Factsheet for TraesCS2A01G552700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G584000.2	Wheat	mitochondrion	96.01	95.66
TraesCS2D01G553300.1	Wheat	mitochondrion	96.91	95.36
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	74.77	82.24
Zm00001d009122_P001	Maize	mitochondrion	69.87	74.76
Os01t0301000-01	Rice	mitochondrion	70.78	74.71
EES02848	Sorghum	mitochondrion	69.51	72.26
Os01t0301500-01	Rice	cytosol, mitochondrion	47.73	54.34
GSMUA_Achr11P...	Banana	mitochondrion	51.18	54.34
VIT_07s0005g01630.t01	Wine grape	mitochondrion	37.21	43.43
PGSC0003DMT400023279	Potato	mitochondrion	37.21	41.41
CDY15237	Canola	mitochondrion	36.3	38.99
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	34.12	38.76
TraesCS6A01G091100.1	Wheat	mitochondrion	35.57	38.66
Bra033321.1-P	Field mustard	mitochondrion	35.93	38.45
CDX89976	Canola	mitochondrion	35.75	38.25
CDX91822	Canola	mitochondrion	34.48	38.0
AT4G01990.1	Thale cress	mitochondrion	34.3	37.65
Bra000902.1-P	Field mustard	mitochondrion	34.12	37.52
CDX90962	Canola	mitochondrion	34.12	37.52
TraesCS6A01G091000.1	Wheat	mitochondrion	34.66	37.45
KRH31780	Soybean	mitochondrion	32.12	37.18
VIT_14s0060g01120.t01	Wine grape	cytosol, mitochondrion	33.58	37.15
TraesCS6A01G090800.2	Wheat	mitochondrion	32.49	37.14
KRH69203	Soybean	cytosol	26.13	37.02
TraesCS6A01G090900.1	Wheat	mitochondrion	31.94	36.74
AT1G02370.1	Thale cress	mitochondrion	35.03	35.94
TraesCS6A01G091200.2	Wheat	cytosol	23.77	35.89
TraesCS2A01G552100.1	Wheat	mitochondrion	35.39	35.45
TraesCS7A01G061300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	32.12	32.96
TraesCS4A01G428500.1	Wheat	mitochondrion	31.94	32.65
Solyc01g100580.2.1	Tomato	mitochondrion	28.13	32.16
PGSC0003DMT400007271	Potato	mitochondrion	27.95	31.88
TraesCS1A01G168800.1	Wheat	mitochondrion	27.95	30.14
TraesCS5A01G099700.1	Wheat	mitochondrion	26.68	28.82
TraesCS2A01G391600.1	Wheat	plastid	25.59	28.03
TraesCS2A01G318100.1	Wheat	mitochondrion	21.05	27.68
TraesCS6A01G358600.1	Wheat	mitochondrion	24.14	25.73
TraesCS1A01G168700.1	Wheat	mitochondrion	26.86	25.34
TraesCS3A01G191200.1	Wheat	mitochondrion	22.14	19.93
TraesCS7A01G296400.1	Wheat	mitochondrion	17.06	18.32

Protein Annotations

EnsemblPlants:TraesCS2A01G552700.1	EnsemblPlantsGene:TraesCS2A01G552700	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF504	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:758530215..758532919

Molecular Weight (calculated)

61560.3 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.477

Length

551 amino acids

Sequence
(BLAST)

001: MAALAPSAGA RFLRRLLSTA AEVAREAPAP AAKNPKKAAR PVGKRAARAV APQDAEKAAH PAAEAAPDAE GAKKAAAAGT KDSRPLYRRL SALGNAGEGS
101: VSAVMNKWLR EGRETRSVDL ERYVKELRRY KRHSQALELM DWMVHTKGMN MSYTNHAIRL DLIYKVRGIE AAEKYFEGLP DPAKNHRTFG ALLNCYCSSK
201: KEEKATDLYR KMDELGIASS TLPINNLMSL YMKLGQHKKV CSLFEEMKEK NVKPDNLTCC ILMTSCAALN KIDDVEQVLK EMEEKGGVLG WSAYSTLASI
301: YQSAGLVEKA ESALKKLEGL VQDRDGRQPF DFLMSLYASV GNLSEVKRVW GVVKGTFPKV TNTSYFSMLQ ALLKLNDADY MKQVFEEWES NHECYDVKLT
401: NVMTRAHLKN GMAKEAEQLW EKAKEMGACF DSKTCELFLD HYMGTGDMKS ALNWVENVTK LPKKAGKLDP DKIPKFSKYF EEQKDVQGAE RFCNCLRALG
501: CIDGKAYESL LRTYLAAGET SRSVRQQIKD DKIEICYDIG KLLKRLGDKG R

Best Arabidopsis Sequence Match ( AT4G01990.1 )
(BLAST)

001: MMHSVSRLAR RFCATLATAT AEISGEAAAS VPTKAKKHRS IYKKLSSLGT RGGGKMEETL NQFVMEGVPV KKHDLIRYAK DLRKFRQPQR ALEIFEWMER
101: KEIAFTGSDH AIRLNLIAKS KGLEAAETYF NSLDDSIKNQ STYGSLLNCY CVEKEEVKAK AHFENMVDLN HVSNSLPFNN LMAMYMGLGQ PEKVPALVVA
201: MKEKSITPCD ITYSMWIQSC GSLKDLDGVE KVLDEMKAEG EGIFSWNTFA NLAAIYIKVG LYGKAEEALK SLENNMNPDV RDCYHFLINL YTGIANASEV
301: YRVWDLLKKR YPNVNNSSYL TMLRALSKLD DIDGVKKVFA EWESTCWTYD MRMANVAISS YLKQNMYEEA EAVFNGAMKK CKGQFSKARQ LLMMHLLKND
401: QADLALKHFE AAVLDQDKNW TWSSELISSF FLHFEEAKDV DGAEEFCKTL TKWSPLSSET YTLLMKTYLA AGKACPDMKK RLEEQGILVD EEQECLLSKI
501: CP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g01990, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93WC5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.