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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033321.1-P Field mustard mitochondrion 97.86 97.86
CDY15237 Canola mitochondrion 95.92 96.3
AT1G02370.1 Thale cress mitochondrion 81.17 77.84
CDX90962 Canola mitochondrion 59.22 60.88
CDX91822 Canola mitochondrion 58.64 60.4
VIT_07s0005g01630.t01 Wine grape mitochondrion 45.83 50.0
PGSC0003DMT400023279 Potato mitochondrion 45.63 47.47
KRH31780 Soybean mitochondrion 41.75 45.17
Solyc01g079320.2.1 Tomato cytosol, mitochondrion 42.52 45.15
KRH69203 Soybean cytosol 32.23 42.67
GSMUA_Achr11P... Banana mitochondrion 40.19 39.88
CDY24553 Canola mitochondrion 20.58 36.81
TraesCS2B01G583500.1 Wheat mitochondrion 33.79 36.25
EES02848 Sorghum mitochondrion 37.28 36.23
Zm00001d009122_P001 Maize mitochondrion 36.12 36.12
CDX96239 Canola mitochondrion 34.37 36.05
CDY34141 Canola mitochondrion 34.17 35.77
TraesCS2A01G552700.1 Wheat mitochondrion 38.25 35.75
CDY46999 Canola mitochondrion 33.98 35.64
Os01t0301000-01 Rice mitochondrion 36.12 35.63
TraesCS2B01G584000.2 Wheat mitochondrion 38.25 35.62
TraesCS2D01G553300.1 Wheat mitochondrion 38.64 35.54
HORVU2Hr1G120330.4 Barley endoplasmic reticulum, extracellular 34.17 35.13
TraesCS6B01G118900.1 Wheat cytosol 27.96 34.62
CDY50357 Canola mitochondrion 13.4 34.5
CDY50358 Canola cytosol 15.53 34.04
CDY24554 Canola cytosol 10.1 33.99
TraesCS6A01G091100.1 Wheat mitochondrion 33.01 33.53
TraesCS6A01G091000.1 Wheat mitochondrion 33.2 33.53
Os01t0301500-01 Rice cytosol, mitochondrion 31.26 33.26
TraesCS6D01G079300.1 Wheat mitochondrion 32.82 33.2
TraesCS6B01G119100.1 Wheat mitochondrion 31.46 32.73
TraesCS6D01G079200.1 Wheat plastid 34.17 32.53
TraesCS6D01G079100.1 Wheat mitochondrion 29.9 32.15
TraesCS2A01G552100.1 Wheat mitochondrion 34.17 32.0
Os01t0301700-01 Rice mitochondrion 31.07 31.75
TraesCS2D01G553100.1 Wheat mitochondrion 33.59 31.74
TraesCS6A01G090800.2 Wheat mitochondrion 29.51 31.54
TraesCS6A01G090900.1 Wheat mitochondrion 29.32 31.52
TraesCS6B01G119000.1 Wheat mitochondrion 29.13 31.32
TraesCS6A01G091200.2 Wheat cytosol 21.94 30.96
HORVU6Hr1G016390.10 Barley plastid 32.82 30.4
HORVU6Hr1G016360.7 Barley mitochondrion 28.93 29.8
CDX98698 Canola mitochondrion 27.77 29.3
CDY15126 Canola cytosol, mitochondrion, plastid 28.54 28.71
CDX90079 Canola mitochondrion 28.54 28.71
CDX99984 Canola mitochondrion 26.21 28.24
CDY19721 Canola mitochondrion 26.02 28.09
TraesCS6D01G079400.1 Wheat plastid 24.47 27.94
CDY25035 Canola mitochondrion, plastid 26.41 27.76
CDX91277 Canola mitochondrion 27.57 27.36
CDX97288 Canola mitochondrion 26.8 26.85
CDY03299 Canola mitochondrion 24.47 26.64
CDY39781 Canola mitochondrion 24.66 26.57
CDY05574 Canola mitochondrion 26.99 26.53
CDY65573 Canola mitochondrion 18.64 25.95
CDY35212 Canola mitochondrion 13.59 24.91
CDY35213 Canola cytosol 1.94 24.39
CDY44801 Canola mitochondrion 19.03 24.26
CDY27645 Canola mitochondrion 10.87 21.62
CDY71968 Canola plastid 12.04 21.23
CDY05786 Canola plastid 19.81 21.03
CDY31943 Canola plastid 19.81 21.03
CDX94049 Canola cytosol 28.35 20.8
CDY09903 Canola mitochondrion 20.39 19.81
CDY06272 Canola mitochondrion 20.19 19.62
CDY57695 Canola mitochondrion 22.14 18.91
CDY00734 Canola mitochondrion 6.21 18.08
CDY48421 Canola mitochondrion 14.17 17.68
CDY39654 Canola mitochondrion 20.58 17.64
CDY36566 Canola mitochondrion 20.58 17.64
CDY27647 Canola mitochondrion 13.4 16.95
CDX97686 Canola plastid 19.42 16.13
CDY30088 Canola plastid 18.64 15.56
CDY53324 Canola mitochondrion, plastid 19.42 13.68
CDY53325 Canola mitochondrion 18.25 13.47
CDX73880 Canola mitochondrion 13.01 13.37
CDX79395 Canola cytosol 22.72 11.41
CDY66759 Canola cytosol 15.92 10.98
CDY36565 Canola cytosol 0.78 1.19
Protein Annotations
EnsemblPlants:CDX89976EnsemblPlantsGene:GSBRNA2T00150470001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF504
PFAM:PF01535PFAM:PF13041PFscan:PS51375ProteinID:CDX89976ProteinID:CDX89976.1SEG:seg
SUPFAM:SSF48452TIGRFAMs:TIGR00756UniParc:UPI0004EE2568MapMan:35.1::
Description
BnaA10g01060D
Coordinates
chrLK031861:-:1049848..1052083
Molecular Weight (calculated)
58483.5 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.350
Length
515 amino acids
Sequence
(BLAST)
001: MNFRNLIASG SRLGKRFCAT VFSPASSAGV VESSVSASPT AASRQREIYK KLSKLSVTGG TVTQTLNQFI MEGTPVRKDD LFRCAKDLRK FRRHQHALEI
101: FDWMEMRKMT LSIADHAIRL DLIAKTKGLE AAESYFNGLD PSTKSHQSTY GALMNCYCVE LKEEKAKSHF EKMDELNFVN NTLPFNNMMS MYMRLGQPEK
201: VSLLVDEMKK REIRPCGITY SIWMQSCGSL NDLEGLEKVI DEMNKDSEAK TTWNTFSSLA GIYTKAGLHE KAESALRTME EKMNPNNRDA HHFLISLYAG
301: ISKASEVERV WEALKKARPE VNNISYLVML QALSKLGDID GVKRVFTEWE SKCCAYDMRL ANIAINAYLK GGMYGEAEMI LEGALKKCKG PFSKLRQLLM
401: VHLLEKGEAG LAMKHLEAAA SDLVENRDDE WSWSSELVSL FFIHFEKAKD VEGAEELCRI LSKWRPLDSE TVTFLIKTYA AVEKTCPDMR ERLFREQIEV
501: SEEMQDLLET VCPQN
Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)
001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.