Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00734 | Canola | mitochondrion | 13.39 | 56.5 |
| CDY53325 | Canola | mitochondrion | 49.4 | 52.87 |
| AT3G11380.1 | Thale cress | mitochondrion | 37.62 | 51.94 |
| CDY71968 | Canola | plastid | 17.4 | 44.52 |
| CDY53324 | Canola | mitochondrion, plastid | 38.42 | 39.26 |
| CDY35213 | Canola | cytosol | 2.01 | 36.59 |
| CDY65573 | Canola | mitochondrion | 17.0 | 34.32 |
| CDY35212 | Canola | mitochondrion | 11.65 | 30.96 |
| CDX73880 | Canola | mitochondrion | 20.35 | 30.34 |
| CDY27645 | Canola | mitochondrion | 9.5 | 27.41 |
| CDY03299 | Canola | mitochondrion | 15.66 | 24.74 |
| CDY39781 | Canola | mitochondrion | 15.8 | 24.69 |
| CDY48421 | Canola | mitochondrion | 13.52 | 24.46 |
| CDY27647 | Canola | mitochondrion | 13.25 | 24.32 |
| CDX98698 | Canola | mitochondrion | 15.53 | 23.77 |
| VIT_12s0028g03870.t01 | Wine grape | cytosol, mitochondrion | 15.13 | 22.65 |
| Zm00001d032543_P001 | Maize | mitochondrion | 15.13 | 21.86 |
| CDY44801 | Canola | mitochondrion | 11.65 | 21.53 |
| OQU91552 | Sorghum | mitochondrion | 14.59 | 21.37 |
| Solyc07g054090.2.1 | Tomato | cytosol, mitochondrion, plastid | 13.92 | 21.1 |
| PGSC0003DMT400047256 | Potato | extracellular | 9.1 | 21.05 |
| Solyc07g054100.1.1 | Tomato | cytosol | 8.97 | 20.74 |
| PGSC0003DMT400047255 | Potato | cytosol, mitochondrion, plastid | 13.65 | 20.48 |
| CDY15126 | Canola | cytosol, mitochondrion, plastid | 13.65 | 19.92 |
| TraesCS1B01G188200.1 | Wheat | mitochondrion | 13.12 | 19.92 |
| TraesCS1D01G166700.1 | Wheat | mitochondrion | 13.12 | 19.8 |
| CDX90079 | Canola | mitochondrion | 13.52 | 19.73 |
| GSMUA_Achr5P20750_001 | Banana | mitochondrion | 14.32 | 19.6 |
| KRH26940 | Soybean | cytosol | 12.99 | 19.56 |
| KRH22399 | Soybean | cytosol | 12.45 | 19.54 |
| CDX97288 | Canola | mitochondrion | 13.39 | 19.46 |
| CDY24553 | Canola | mitochondrion | 7.5 | 19.44 |
| CDX91277 | Canola | mitochondrion | 13.39 | 19.27 |
| CDY50357 | Canola | mitochondrion | 5.09 | 19.0 |
| CDY31943 | Canola | plastid | 12.32 | 18.97 |
| CDY05786 | Canola | plastid | 12.32 | 18.97 |
| Os10t0501300-01 | Rice | mitochondrion | 12.99 | 18.91 |
| CDX94049 | Canola | cytosol | 17.54 | 18.66 |
| CDY25035 | Canola | mitochondrion, plastid | 12.18 | 18.57 |
| CDY19721 | Canola | mitochondrion | 11.65 | 18.24 |
| CDX99984 | Canola | mitochondrion | 11.65 | 18.2 |
| TraesCS1A01G168700.1 | Wheat | mitochondrion | 14.06 | 17.98 |
| Os10t0501000-01 | Rice | cytosol | 10.71 | 17.74 |
| CDY46999 | Canola | mitochondrion | 11.65 | 17.72 |
| CDY34141 | Canola | mitochondrion | 11.65 | 17.68 |
| CDY50358 | Canola | cytosol | 5.49 | 17.45 |
| CDX91822 | Canola | mitochondrion | 11.65 | 17.4 |
| CDX90962 | Canola | mitochondrion | 11.65 | 17.37 |
| CDX96239 | Canola | mitochondrion | 11.38 | 17.31 |
| CDY05574 | Canola | mitochondrion | 11.91 | 16.98 |
| Os10t0501200-00 | Rice | mitochondrion | 14.19 | 16.93 |
| CDY15237 | Canola | mitochondrion | 10.98 | 15.98 |
| CDX89976 | Canola | mitochondrion | 10.98 | 15.92 |
| CDX97686 | Canola | plastid | 12.85 | 15.48 |
| CDY30088 | Canola | plastid | 12.72 | 15.4 |
| CDY09903 | Canola | mitochondrion | 10.71 | 15.09 |
| CDY06272 | Canola | mitochondrion | 10.44 | 14.72 |
| CDY39654 | Canola | mitochondrion | 11.51 | 14.31 |
| CDY36566 | Canola | mitochondrion | 11.51 | 14.31 |
| CDY24554 | Canola | cytosol | 2.81 | 13.73 |
| CDY57695 | Canola | mitochondrion | 10.84 | 13.43 |
| CDX79395 | Canola | cytosol | 12.58 | 9.17 |
| CDY36565 | Canola | cytosol | 0.8 | 1.79 |
Protein Annotations
| Gene3D:1.20.5.170 | Gene3D:1.25.40.10 | MapMan:35.1 | GO:A0A078JJB5 | UniProt:A0A078JJB5 | EnsemblPlants:CDY66759 |
| ProteinID:CDY66759 | ProteinID:CDY66759.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00055690001 | InterPro:IPR002885 | InterPro:IPR011990 |
| PFAM:PF01535 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF644 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF81901 |
| TIGRFAMs:TIGR00756 | TMHMM:TMhelix | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EF2BF5 | SEG:seg | : |
Description
BnaCnng52230DBnaCnng52230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJB5]
Coordinates
chrLK035448:-:4136..14835
Molecular Weight (calculated)
85142.4 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.461
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLYSVLGK RTEIENLLRK MEDKNIELDS VTMNSVSRVR NKVGEMGVVK SLSKFDDVQG AQKMYGEWEQ SSGGAEFDAK IPGGEMKIKR FMQNMVGVVL
101: IICLVIALSM ILHAAAADPD LAFSVAMLCL LPAEAAECFM AEAYCKQHLT TLRKTLVATV LGFGQNEKRR SRVAQNPKTE LESMISLQQH AKRILAHSTK
201: PRLRLFCSNS NETLWASNQV LQNRIESALN HKAKISTVLE QWRQQGNNLN PTLVRGILEK LRDTKRLHST FDLVENVLGF EEAEKFLEKV PENLRNESMY
301: TSLLKSYAES GNKDVDRAEA AFKKMRELGL LLKPSPYSYM MSLYSSVGNR GKVDEVLREM KENNVKLDNL DMAKAYLRVG SKREAREMLV RAEELNDPSS
401: YEELMRLYGE AGDSGDVYRI WNLYKKTREQ DNDGFLALIE SLLNLDDINI AAEMYYSEYA LSGLEFDVRI PTMLASGFRK HGMVQQADIL MNKTLRNIRF
501: GNKPITPFLE EWGKMGSQVK PSEFRDLIKN LQDSNKLSIA LEASSWFCDQ KMINLFPEDY ADRLDLTEKV LGLKEADKFF DTSIPETMKG YSVYTTLLNM
601: YTRAHQDVGE AEAIFEKMGE LGFLNKLSPF KSMISIYSVF LKRVEIDNLL RKMKEKNIDP DSVTMYNVHV FHRTRLDLDH ARLEKDHARL EKDHARLEKD
701: HARLDLGGEE TEDGHVFSSG GPSGQSRKRP YRYPVHPSGS DEPGHLD
101: IICLVIALSM ILHAAAADPD LAFSVAMLCL LPAEAAECFM AEAYCKQHLT TLRKTLVATV LGFGQNEKRR SRVAQNPKTE LESMISLQQH AKRILAHSTK
201: PRLRLFCSNS NETLWASNQV LQNRIESALN HKAKISTVLE QWRQQGNNLN PTLVRGILEK LRDTKRLHST FDLVENVLGF EEAEKFLEKV PENLRNESMY
301: TSLLKSYAES GNKDVDRAEA AFKKMRELGL LLKPSPYSYM MSLYSSVGNR GKVDEVLREM KENNVKLDNL DMAKAYLRVG SKREAREMLV RAEELNDPSS
401: YEELMRLYGE AGDSGDVYRI WNLYKKTREQ DNDGFLALIE SLLNLDDINI AAEMYYSEYA LSGLEFDVRI PTMLASGFRK HGMVQQADIL MNKTLRNIRF
501: GNKPITPFLE EWGKMGSQVK PSEFRDLIKN LQDSNKLSIA LEASSWFCDQ KMINLFPEDY ADRLDLTEKV LGLKEADKFF DTSIPETMKG YSVYTTLLNM
601: YTRAHQDVGE AEAIFEKMGE LGFLNKLSPF KSMISIYSVF LKRVEIDNLL RKMKEKNIDP DSVTMYNVHV FHRTRLDLDH ARLEKDHARL EKDHARLEKD
701: HARLDLGGEE TEDGHVFSSG GPSGQSRKRP YRYPVHPSGS DEPGHLD
001: MSMRHNLQRH AKRILAYSNR PRFFCSYTNV TLSSPATNQT LQSRIEAASH QKAEITTVLE QWLQQQQQQG KQLNPSLLRG IVEKLRSSNR PRQALEVSDW
101: MVEQKMYNLP EDFSARFHLT EKVLNLEEAE KFFESIPENM RFESMYNSLL RSYARQSGEK ALKKAESVFK KMKKLGLLLR PSPYNSMTSL YSSLGNRDKV
201: DEILREMKEN NVELDNVTVN NALRVYAAVS DVATMDKFLA DRKEITRLDG LTMLAMAKAY ELMSLYGEAG EIEDVHRVWD KYKATRQKDN EEFRTLIGSL
301: LKLGDTKGAE KIYYNEWECS GLEFDNRIPD MLVSGYREKG MVMKADKLVN KTLWIRGLAT PITLLLEEMD KKGNKVSPPG LRDLIKNLRD SNQLSKALEA
401: STWMCQKKVF NLFSEDYATR LHLTEKVLGL EEAENFFESS IPENMKDYSV YDTLLSCYAR SSNTQSKAEA VFEKMRELGL QSKLSPFNSL ISLYSGQGKL
501: SVVNILLCDM KHKNIEPDIV TRNNVLRANA YILAIDSMEK V
101: MVEQKMYNLP EDFSARFHLT EKVLNLEEAE KFFESIPENM RFESMYNSLL RSYARQSGEK ALKKAESVFK KMKKLGLLLR PSPYNSMTSL YSSLGNRDKV
201: DEILREMKEN NVELDNVTVN NALRVYAAVS DVATMDKFLA DRKEITRLDG LTMLAMAKAY ELMSLYGEAG EIEDVHRVWD KYKATRQKDN EEFRTLIGSL
301: LKLGDTKGAE KIYYNEWECS GLEFDNRIPD MLVSGYREKG MVMKADKLVN KTLWIRGLAT PITLLLEEMD KKGNKVSPPG LRDLIKNLRD SNQLSKALEA
401: STWMCQKKVF NLFSEDYATR LHLTEKVLGL EEAENFFESS IPENMKDYSV YDTLLSCYAR SSNTQSKAEA VFEKMRELGL QSKLSPFNSL ISLYSGQGKL
501: SVVNILLCDM KHKNIEPDIV TRNNVLRANA YILAIDSMEK V
Arabidopsis Description
Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAY6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.