Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000902.1-P | Field mustard | mitochondrion | 98.8 | 98.8 |
| CDX91822 | Canola | mitochondrion | 94.61 | 94.8 |
| AT4G01990.1 | Thale cress | mitochondrion | 74.85 | 74.7 |
| CDY15237 | Canola | mitochondrion | 61.08 | 59.65 |
| CDX89976 | Canola | mitochondrion | 60.88 | 59.22 |
| VIT_07s0005g01630.t01 | Wine grape | mitochondrion | 42.32 | 44.92 |
| PGSC0003DMT400023279 | Potato | mitochondrion | 44.31 | 44.85 |
| Solyc01g079320.2.1 | Tomato | cytosol, mitochondrion | 41.92 | 43.3 |
| KRH69203 | Soybean | cytosol | 33.13 | 42.67 |
| KRH31780 | Soybean | mitochondrion | 40.12 | 42.23 |
| GSMUA_Achr11P... | Banana | mitochondrion | 38.92 | 37.57 |
| CDY24553 | Canola | mitochondrion | 21.16 | 36.81 |
| CDY34141 | Canola | mitochondrion | 35.13 | 35.77 |
| Os01t0301000-01 | Rice | mitochondrion | 37.13 | 35.63 |
| CDX96239 | Canola | mitochondrion | 34.73 | 35.44 |
| Zm00001d009122_P001 | Maize | mitochondrion | 36.13 | 35.15 |
| CDY46999 | Canola | mitochondrion | 34.33 | 35.03 |
| TraesCS6B01G118900.1 | Wheat | cytosol | 28.74 | 34.62 |
| TraesCS2B01G584000.2 | Wheat | mitochondrion | 37.72 | 34.18 |
| TraesCS2A01G552700.1 | Wheat | mitochondrion | 37.52 | 34.12 |
| CDY50358 | Canola | cytosol | 15.97 | 34.04 |
| TraesCS6D01G079300.1 | Wheat | mitochondrion | 34.53 | 33.99 |
| EES02848 | Sorghum | mitochondrion | 35.93 | 33.96 |
| TraesCS2D01G553300.1 | Wheat | mitochondrion | 37.92 | 33.93 |
| TraesCS6A01G091100.1 | Wheat | mitochondrion | 34.13 | 33.73 |
| TraesCS6B01G119100.1 | Wheat | mitochondrion | 33.13 | 33.54 |
| TraesCS6A01G091000.1 | Wheat | mitochondrion | 34.13 | 33.53 |
| HORVU2Hr1G120330.4 | Barley | endoplasmic reticulum, extracellular | 33.33 | 33.33 |
| TraesCS2B01G583500.1 | Wheat | mitochondrion | 31.74 | 33.12 |
| TraesCS6D01G079100.1 | Wheat | mitochondrion | 31.14 | 32.57 |
| CDY50357 | Canola | mitochondrion | 12.97 | 32.5 |
| TraesCS6B01G119000.1 | Wheat | mitochondrion | 30.94 | 32.36 |
| TraesCS6D01G079200.1 | Wheat | plastid | 34.93 | 32.35 |
| Os01t0301700-01 | Rice | mitochondrion | 32.34 | 32.14 |
| TraesCS6A01G090800.2 | Wheat | mitochondrion | 30.74 | 31.95 |
| TraesCS6A01G090900.1 | Wheat | mitochondrion | 30.54 | 31.94 |
| TraesCS6A01G091200.2 | Wheat | cytosol | 22.55 | 30.96 |
| TraesCS2A01G552100.1 | Wheat | mitochondrion | 33.53 | 30.55 |
| Os01t0301500-01 | Rice | cytosol, mitochondrion | 29.34 | 30.37 |
| HORVU6Hr1G016390.10 | Barley | plastid | 33.53 | 30.22 |
| HORVU6Hr1G016360.7 | Barley | mitochondrion | 30.14 | 30.2 |
| CDY24554 | Canola | cytosol | 9.18 | 30.07 |
| TraesCS2D01G553100.1 | Wheat | mitochondrion | 32.53 | 29.91 |
| CDX98698 | Canola | mitochondrion | 27.74 | 28.48 |
| CDX90079 | Canola | mitochondrion | 28.94 | 28.32 |
| TraesCS6D01G079400.1 | Wheat | plastid | 25.35 | 28.16 |
| CDY15126 | Canola | cytosol, mitochondrion, plastid | 28.74 | 28.12 |
| CDX99984 | Canola | mitochondrion | 25.35 | 26.57 |
| CDY25035 | Canola | mitochondrion, plastid | 25.75 | 26.33 |
| CDY19721 | Canola | mitochondrion | 24.75 | 26.0 |
| CDX97288 | Canola | mitochondrion | 26.35 | 25.68 |
| CDX91277 | Canola | mitochondrion | 26.15 | 25.24 |
| CDY05574 | Canola | mitochondrion | 25.75 | 24.62 |
| CDY35213 | Canola | cytosol | 2.0 | 24.39 |
| CDY03299 | Canola | mitochondrion | 22.55 | 23.89 |
| CDY44801 | Canola | mitochondrion | 19.16 | 23.76 |
| CDY39781 | Canola | mitochondrion | 22.36 | 23.43 |
| CDY65573 | Canola | mitochondrion | 16.57 | 22.43 |
| CDY71968 | Canola | plastid | 12.38 | 21.23 |
| CDY35212 | Canola | mitochondrion | 11.58 | 20.64 |
| CDY05786 | Canola | plastid | 19.76 | 20.41 |
| CDY09903 | Canola | mitochondrion | 21.56 | 20.38 |
| CDY31943 | Canola | plastid | 19.36 | 20.0 |
| CDX94049 | Canola | cytosol | 27.94 | 19.94 |
| CDY06272 | Canola | mitochondrion | 20.96 | 19.81 |
| CDY57695 | Canola | mitochondrion | 23.55 | 19.57 |
| CDY27645 | Canola | mitochondrion | 9.98 | 19.3 |
| CDY00734 | Canola | mitochondrion | 6.79 | 19.21 |
| CDY36566 | Canola | mitochondrion | 22.75 | 18.97 |
| CDY39654 | Canola | mitochondrion | 22.36 | 18.64 |
| CDX97686 | Canola | plastid | 21.36 | 17.26 |
| CDY30088 | Canola | plastid | 20.56 | 16.69 |
| CDY48421 | Canola | mitochondrion | 13.57 | 16.46 |
| CDY27647 | Canola | mitochondrion | 12.97 | 15.97 |
| CDY53325 | Canola | mitochondrion | 21.16 | 15.19 |
| CDY53324 | Canola | mitochondrion, plastid | 21.36 | 14.64 |
| CDX73880 | Canola | mitochondrion | 13.37 | 13.37 |
| CDY66759 | Canola | cytosol | 17.37 | 11.65 |
| CDX79395 | Canola | cytosol | 23.35 | 11.41 |
| CDY36565 | Canola | cytosol | 0.8 | 1.19 |
Protein Annotations
| EnsemblPlants:CDX90962 | EnsemblPlantsGene:GSBRNA2T00151715001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF504 |
| PFAM:PF01535 | PFAM:PF13812 | PFscan:PS51375 | ProteinID:CDX90962 | ProteinID:CDX90962.1 | SEG:seg |
| SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | UniParc:UPI0004EDD33F | MapMan:35.1 | : | : |
Description
BnaA03g26420D
Coordinates
chrLK031864:+:1561313..1563643
Molecular Weight (calculated)
56479.9 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.334
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSMYSASRL ARRFCATLAS APAAIVGEAA AASSTRKTAK KQRSVYKKLS NLGSRGGKME ETLNKVAMEG IPIVKHDFVR YAKDLRKNRL PQRALEVFEW
101: MEKKEIAFTG SDHAIRLDLI AKTKGLEAAE TYFNTLDPSS KNRSSYGALL NCYCVERDED KAKSHFNEMV DLNLVTNSLP FNNLMAMYLR LGQYDKVPAL
201: VLAMKEKNIP PCAITYSMWI QSCGSLNDLD GVEKVVEEMK DDSSWDTFAN LASIYAKAGL FSKAEAALKS LEEKMNPHKR DSYHFLISLY AGISNPSEVY
301: RVWELLKKGH PKVNNSSSLA MVQALSRLND FDGIKKVFKE WESTCYTYDM RVANVMISSY LKENMYEEAE AVFDGAVKKC KGQLSKARQL LMVYLLKNDQ
401: AGLALKHLEA AVLDQDKNWS WSSELVSLFF LHFEKSKDVD GAEELCKTLV KWSPLGSESY TPLLKTYVAA ERTCNGMQKR LEEEGIEIDD EMEGLLSKIC
501: T
101: MEKKEIAFTG SDHAIRLDLI AKTKGLEAAE TYFNTLDPSS KNRSSYGALL NCYCVERDED KAKSHFNEMV DLNLVTNSLP FNNLMAMYLR LGQYDKVPAL
201: VLAMKEKNIP PCAITYSMWI QSCGSLNDLD GVEKVVEEMK DDSSWDTFAN LASIYAKAGL FSKAEAALKS LEEKMNPHKR DSYHFLISLY AGISNPSEVY
301: RVWELLKKGH PKVNNSSSLA MVQALSRLND FDGIKKVFKE WESTCYTYDM RVANVMISSY LKENMYEEAE AVFDGAVKKC KGQLSKARQL LMVYLLKNDQ
401: AGLALKHLEA AVLDQDKNWS WSSELVSLFF LHFEKSKDVD GAEELCKTLV KWSPLGSESY TPLLKTYVAA ERTCNGMQKR LEEEGIEIDD EMEGLLSKIC
501: T
001: MMHSVSRLAR RFCATLATAT AEISGEAAAS VPTKAKKHRS IYKKLSSLGT RGGGKMEETL NQFVMEGVPV KKHDLIRYAK DLRKFRQPQR ALEIFEWMER
101: KEIAFTGSDH AIRLNLIAKS KGLEAAETYF NSLDDSIKNQ STYGSLLNCY CVEKEEVKAK AHFENMVDLN HVSNSLPFNN LMAMYMGLGQ PEKVPALVVA
201: MKEKSITPCD ITYSMWIQSC GSLKDLDGVE KVLDEMKAEG EGIFSWNTFA NLAAIYIKVG LYGKAEEALK SLENNMNPDV RDCYHFLINL YTGIANASEV
301: YRVWDLLKKR YPNVNNSSYL TMLRALSKLD DIDGVKKVFA EWESTCWTYD MRMANVAISS YLKQNMYEEA EAVFNGAMKK CKGQFSKARQ LLMMHLLKND
401: QADLALKHFE AAVLDQDKNW TWSSELISSF FLHFEEAKDV DGAEEFCKTL TKWSPLSSET YTLLMKTYLA AGKACPDMKK RLEEQGILVD EEQECLLSKI
501: CP
101: KEIAFTGSDH AIRLNLIAKS KGLEAAETYF NSLDDSIKNQ STYGSLLNCY CVEKEEVKAK AHFENMVDLN HVSNSLPFNN LMAMYMGLGQ PEKVPALVVA
201: MKEKSITPCD ITYSMWIQSC GSLKDLDGVE KVLDEMKAEG EGIFSWNTFA NLAAIYIKVG LYGKAEEALK SLENNMNPDV RDCYHFLINL YTGIANASEV
301: YRVWDLLKKR YPNVNNSSYL TMLRALSKLD DIDGVKKVFA EWESTCWTYD MRMANVAISS YLKQNMYEEA EAVFNGAMKK CKGQFSKARQ LLMMHLLKND
401: QADLALKHFE AAVLDQDKNW TWSSELISSF FLHFEEAKDV DGAEEFCKTL TKWSPLSSET YTLLMKTYLA AGKACPDMKK RLEEQGILVD EEQECLLSKI
501: CP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At4g01990, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93WC5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.