CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31943	Canola	plastid	96.7	96.7
AT2G20720.1	Thale cress	cytosol	35.88	58.19
CDY35212	Canola	mitochondrion	18.56	32.03
CDY39781	Canola	mitochondrion	31.34	31.8
CDY03299	Canola	mitochondrion	30.93	31.71
CDY65573	Canola	mitochondrion	23.3	30.54
CDY27645	Canola	mitochondrion	16.29	30.5
CDY00734	Canola	mitochondrion	9.9	27.12
CDY71968	Canola	plastid	16.29	27.05
VIT_12s0028g03870.t01	Wine grape	cytosol, mitochondrion	26.6	25.85
Solyc07g054100.1.1	Tomato	cytosol	16.29	24.46
Solyc07g054090.2.1	Tomato	cytosol, mitochondrion, plastid	24.54	24.14
PGSC0003DMT400047255	Potato	cytosol, mitochondrion, plastid	24.54	23.9
PGSC0003DMT400047256	Potato	extracellular	15.88	23.84
TraesCS1B01G188200.1	Wheat	mitochondrion	23.71	23.37
CDY48421	Canola	mitochondrion	19.79	23.24
KRH22399	Soybean	cytosol	22.68	23.11
KRH26940	Soybean	cytosol	23.3	22.78
TraesCS1D01G166700.1	Wheat	mitochondrion	23.09	22.63
CDY27647	Canola	mitochondrion	18.97	22.6
Os10t0501300-01	Rice	mitochondrion	23.09	21.83
OQU91552	Sorghum	mitochondrion	22.47	21.37
CDY19721	Canola	mitochondrion	20.41	20.75
CDX98698	Canola	mitochondrion	20.82	20.7
CDY24553	Canola	mitochondrion	12.16	20.49
CDX91822	Canola	mitochondrion	21.03	20.4
Zm00001d032543_P001	Maize	mitochondrion	21.65	20.31
CDX99984	Canola	mitochondrion	20.0	20.29
CDX91277	Canola	mitochondrion	21.65	20.23
Os10t0501000-01	Rice	cytosol	18.76	20.18
GSMUA_Achr5P20750_001	Banana	mitochondrion	22.68	20.15
CDX97288	Canola	mitochondrion	21.24	20.04
CDY25035	Canola	mitochondrion, plastid	20.21	20.0
CDY50357	Canola	mitochondrion	8.25	20.0
CDX89976	Canola	mitochondrion	21.03	19.81
CDY44801	Canola	mitochondrion	16.49	19.8
CDX90962	Canola	mitochondrion	20.41	19.76
CDY15237	Canola	mitochondrion	20.82	19.69
CDY15126	Canola	cytosol, mitochondrion, plastid	20.62	19.53
CDX90079	Canola	mitochondrion	20.41	19.34
TraesCS1A01G168700.1	Wheat	mitochondrion	22.89	19.01
CDY05574	Canola	mitochondrion	20.21	18.7
CDX96239	Canola	mitochondrion	18.35	18.13
CDY46999	Canola	mitochondrion	18.14	17.92
Os10t0501200-00	Rice	mitochondrion	22.89	17.73
CDY34141	Canola	mitochondrion	16.91	16.67
CDY53325	Canola	mitochondrion	23.3	16.19
CDY53324	Canola	mitochondrion, plastid	23.71	15.73
CDX73880	Canola	mitochondrion	16.08	15.57
CDY39654	Canola	mitochondrion	18.97	15.31
CDY57695	Canola	mitochondrion	18.76	15.09
CDY50358	Canola	cytosol	7.22	14.89
CDX94049	Canola	cytosol	21.44	14.81
CDY36566	Canola	mitochondrion	18.35	14.81
CDY35213	Canola	cytosol	1.24	14.63
CDY09903	Canola	mitochondrion	15.46	14.15
CDY06272	Canola	mitochondrion	15.26	13.96
CDX97686	Canola	plastid	17.53	13.71
CDY30088	Canola	plastid	17.11	13.45
CDY66759	Canola	cytosol	18.97	12.32
CDY24554	Canola	cytosol	3.3	10.46
CDX79395	Canola	cytosol	18.76	8.88
CDY36565	Canola	cytosol	1.03	1.49

Protein Annotations

EnsemblPlants:CDY05786	EnsemblPlantsGene:GSBRNA2T00120866001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF644
PFAM:PF01535	PFscan:PS51375	ProteinID:CDY05786	ProteinID:CDY05786.1	SEG:seg	UniParc:UPI0004EF111A
MapMan:35.1	:	:	:	:	:

Description

BnaC07g00170D

Coordinates

chrLK031964:-:995562..997177

Molecular Weight (calculated)

55392.5 Da

IEP (calculated)

7.047

GRAVY (calculated)

-0.476

Length

485 amino acids

Sequence
(BLAST)

001: MNHLLRPQFG SFRSSLPFRC SFLRFPKTVP SPDPVHDSLK RRIERAPDST PSLTPLLHEW RQLGNKPGLS ELRSIISSLH KFDRFSHALQ VSEWMSDQQI
101: YNLSTVDFEI RLLLIAKLGG LEEASKFLDT IPLKKRDFYV HNALLNSCKT HGSLSIAETT FQKMIDLGLA SNNPKPYNTM LSLYHSAGNH DMVVKLLLEM
201: DDHRLEPQGV PFGKLFSCFA LASCVKDSVG MEKFLNKWGD RMEPWATSFF PACLYMELGS VDKGLSLFRK TEELLDDDCR KNMYGALMRV YCHNGEREDV
301: YRLSNLAKLH GISFGATVSS EMIKFFAMKN DFDGAHEIME EWDTGAGDLG LSDFGHRKRC MKEEADKAIN MLGKKWESKW ESLTDMLQQN LAEGEDEDGE
401: RERRKRVTEA LEGRLHERWN PKTTKTLSAY ACVQYVEGRR DMESAAEILK LLNKQELVSR AMDKDRLCLK MVEAMRGGGY VGGQD

Best Arabidopsis Sequence Match ( AT2G20720.1 )
(BLAST)

001: MLCLYHQAED HDMVVKLLGE MDEKKMQPQG LCFVKLLTSY SMASVVDVQG VEKFLSKWEV MIQDKWTTFY FPGLVYIRAG FMEKGLALLR RSETFVDDGC
101: REIIYGCLMT VYCNENLTED VYRLWNLAKD YGISFDSSRC SDIVKAFTKK GDLDGVMEEW NECPNLDLMD FGLQHRCVKE EAEKVVDMLG KKESKWESLA
201: HKVNTLVEDE DAKEEERRKR VAEAMEGRLH DRWNPKNSMA LSAFACVQYV EGRRDMESTA DILRLLNKRE QVSHAMDKNR LSLKMVEAMR GGGYVGGDD

Arabidopsis Description

At2g20720 [Source:UniProtKB/TrEMBL;Acc:Q8L705]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.