Factsheet for Os10t0501300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0501000-01	Rice	cytosol	66.08	75.17
Os10t0501200-00	Rice	mitochondrion	81.48	66.77
TraesCS1B01G188200.1	Wheat	mitochondrion	59.84	62.4
TraesCS1D01G166700.1	Wheat	mitochondrion	59.26	61.41
Zm00001d032543_P001	Maize	mitochondrion	57.12	56.67
OQU91552	Sorghum	mitochondrion	56.34	56.67
TraesCS1A01G168700.1	Wheat	mitochondrion	59.45	52.23
GSMUA_Achr5P20750_001	Banana	mitochondrion	41.91	39.38
CDY39781	Canola	mitochondrion	31.77	34.1
AT2G20710.1	Thale cress	mitochondrion	32.55	34.08
Solyc02g078330.2.1	Tomato	cytosol, mitochondrion	30.02	33.92
Bra036673.1-P	Field mustard	mitochondrion	31.58	33.89
CDY03299	Canola	mitochondrion	30.99	33.62
VIT_12s0028g03880.t01	Wine grape	cytosol, mitochondrion	32.75	33.53
PGSC0003DMT400076352	Potato	cytosol, mitochondrion	31.19	33.47
PGSC0003DMT400058755	Potato	cytosol	25.73	33.42
PGSC0003DMT400047256	Potato	extracellular	20.66	32.82
Solyc07g054100.1.1	Tomato	cytosol	20.27	32.2
KRH26940	Soybean	cytosol	30.99	32.06
KRH22399	Soybean	cytosol	29.43	31.72
Solyc07g054090.2.1	Tomato	cytosol, mitochondrion, plastid	30.02	31.24
PGSC0003DMT400047255	Potato	cytosol, mitochondrion, plastid	29.82	30.72
Os07t0598500-01	Rice	mitochondrion	29.43	29.84
CDY35213	Canola	cytosol	2.34	29.27
Os12t0527900-01	Rice	mitochondrion	29.24	29.18
CDY35212	Canola	mitochondrion	15.59	28.47
Os04t0544400-00	Rice	plastid	28.27	28.38
Bra011054.1-P	Field mustard	mitochondrion	18.71	28.15
Os02t0796400-00	Rice	mitochondrion	27.88	27.66
CDY65573	Canola	mitochondrion	19.88	27.57
Os01t0301700-01	Rice	mitochondrion	26.71	27.18
AT1G28020.1	Thale cress	cytosol, plastid	25.73	26.72
CDY71968	Canola	plastid	15.2	26.71
Os01t0301000-01	Rice	mitochondrion	27.1	26.63
CDY27645	Canola	mitochondrion	13.26	26.25
AT1G43010.1	Thale cress	mitochondrion	12.87	25.68
Os04t0320200-01	Rice	mitochondrion	25.93	25.38
CDY00734	Canola	mitochondrion	8.58	24.86
Os01t0301500-01	Rice	cytosol, mitochondrion	23.0	24.38
Os04t0450200-01	Rice	cytosol	13.65	23.97
AT3G11380.1	Thale cress	mitochondrion	24.95	23.66
CDY05786	Canola	plastid	21.83	23.09
CDY31943	Canola	plastid	21.44	22.68
Bra036496.1-P	Field mustard	plastid	21.44	22.68
AT3G11350.1	Thale cress	mitochondrion	15.01	21.45
CDY48421	Canola	mitochondrion	16.96	21.07
Bra032862.1-P	Field mustard	mitochondrion	15.4	20.84
AT1G28000.1	Thale cress	mitochondrion	15.59	20.62
Bra032863.1-P	Field mustard	mitochondrion	15.98	20.5
Os12t0170100-01	Rice	mitochondrion	24.17	20.29
Os01t0280400-00	Rice	mitochondrion	24.17	20.29
CDY27647	Canola	mitochondrion	15.79	19.9
AT2G20720.1	Thale cress	cytosol	11.5	19.73
Bra001400.1-P	Field mustard	mitochondrion, plastid	26.9	18.42
CDY53324	Canola	mitochondrion, plastid	26.12	18.33
Bra032865.1-P	Field mustard	cytosol	19.3	17.25
CDY53325	Canola	mitochondrion	23.0	16.91
CDX73880	Canola	mitochondrion	15.98	16.37
Bra032866.1-P	Field mustard	mitochondrion	17.35	13.95
CDY66759	Canola	cytosol	18.91	12.99
Os07t0222700-01	Rice	mitochondrion	2.73	7.07

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	ProteinID:AAM93671.1	ProteinID:AAP54477.1	ProteinID:BAF26899.1	ProteinID:BAT11529.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0501300	EnsemblPlants:Os10t0501300-01	PFAM:PF01535
PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF625	InterPro:Pentatricopeptide_repeat	UniProt:Q8LNF7
SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000A4331	SEG:seg	:

Description

pentatricopeptide repeat motif containing gene 10, PPR motif-containing gene 10Pentatricopeptide repeat domain containing protein. (Os10t0501300-01)

Coordinates

chr10:+:19112236..19114168

Molecular Weight (calculated)

58295.4 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.315

Length

513 amino acids

Sequence
(BLAST)

001: MLLHRRGLLL HLRGGLLRRR RGLSVSAEET VSPSPPPPPP PPPPRLQGED SLFRRVAGAD PRIPLAPVLE QWWLAEERPV SKPELQSLVK YLRRRCRFSQ
101: ALELSMWMTE RRHLHLSPGD VAYRLELISK VHGLDKAVEY FDAVPNQLRE LQCYGSLLRC YAEAERVEKA EELFENMRGM GMANSYAYNA MMNLYSQIGQ
201: VERVDSMYKA MEEGGIVPDI FTIDNLVSAY ADVEDVEAIE KVLEKASCNN LMSWHSFAIV GKVFMKAGMQ ERALQAFQES EKRITARKDG RVAYGFLLTM
301: YADLQMDSEV DRIWDVYRSK VPASACNTMY MCRISVLLKM NDIVGAEKAY EEWESKHVYH DSRLINILLT AYCKEGLMEK AEALVDQFIK KGRTLFSNTW
401: YKLAGGYFKV GQVSKAADLT KKALASASNE WKPDLANVLM SINYFAEQKN VEAAEEMASL LQRLVPLTRD VYHGLLKTYV NAGEPASDLL DRMKKDGIEA
501: DEETDKILAG EVH

Best Arabidopsis Sequence Match ( AT2G20710.1 )
(BLAST)

001: MKHLLLLRLV LPKPNYILRR SFLFHSGKTT PSPLDPYDTL QRRVARSGDP SASIIKVLDG WLDQGNLVKT SELHSIIKML RKFSRFSHAL QISDWMSEHR
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.