Factsheet for Os07t0598500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G166800.1	Wheat	mitochondrion	81.42	80.63
TraesCS1B01G188100.1	Wheat	mitochondrion	81.23	80.43
TraesCS1A01G168800.1	Wheat	mitochondrion	80.83	80.04
HORVU1Hr1G045170.4	Barley	cytosol, mitochondrion, nucleus, plastid	81.03	79.0
EER91421	Sorghum	mitochondrion	75.89	77.42
EER90330	Sorghum	mitochondrion	75.89	76.49
Zm00001d013923_P001	Maize	mitochondrion	74.7	75.6
EER90329	Sorghum	mitochondrion	68.97	69.38
GSMUA_Achr1P02980_001	Banana	mitochondrion	57.71	55.09
KRH10858	Soybean	mitochondrion	46.44	48.35
PGSC0003DMT400032340	Potato	mitochondrion	45.85	47.93
VIT_10s0597g00040.t01	Wine grape	extracellular	47.43	47.43
VIT_19s0014g02920.t01	Wine grape	mitochondrion, plastid	47.23	47.42
Bra038762.1-P	Field mustard	mitochondrion	43.28	44.88
CDX98698	Canola	mitochondrion	43.28	44.88
AT4G21705.1	Thale cress	mitochondrion	43.28	44.51
KRH55328	Soybean	plastid	42.29	43.5
Solyc02g078350.2.1	Tomato	cytosol, mitochondrion	40.91	42.16
PGSC0003DMT400076417	Potato	cytosol, mitochondrion	40.71	41.96
Solyc07g063220.2.1	Tomato	plastid	45.45	41.44
CDX94049	Canola	cytosol	42.69	30.77
Os01t0301000-01	Rice	mitochondrion	31.03	30.08
Os10t0501300-01	Rice	mitochondrion	29.84	29.43
Os10t0501000-01	Rice	cytosol	25.69	28.82
Os04t0544400-00	Rice	plastid	28.85	28.57
Os04t0320200-01	Rice	mitochondrion	29.05	28.05
Os01t0301700-01	Rice	mitochondrion	27.87	27.98
Os02t0796400-00	Rice	mitochondrion	27.47	26.89
Os12t0527900-01	Rice	mitochondrion	26.48	26.07
Os04t0450200-01	Rice	cytosol	14.82	25.68
Os10t0501200-00	Rice	mitochondrion	30.43	24.6
Os01t0301500-01	Rice	cytosol, mitochondrion	21.54	22.52
Os01t0280400-00	Rice	mitochondrion	22.33	18.49
Os12t0170100-01	Rice	mitochondrion	21.34	17.68
Os07t0222700-01	Rice	mitochondrion	3.16	8.08

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4343805	EMBL:AK073214	ProteinID:BAC83218.1	ProteinID:BAF22097.1
ProteinID:BAT02501.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os07g0598500
EnsemblPlants:Os07t0598500-01	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1655
InterPro:Pentatricopeptide_repeat	UniProt:Q6ZJE1	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00001BF250	RefSeq:XP_015645075.1
SEG:seg	:	:	:	:	:

Description

Pentatricopeptide repeat domain containing protein. (Os07t0598500-01)

Coordinates

chr7:-:24419887..24422315

Molecular Weight (calculated)

56518.1 Da

IEP (calculated)

8.840

GRAVY (calculated)

-0.344

Length

506 amino acids

Sequence
(BLAST)

001: MAASSSFLAA GRRLIRLGCG RLLPAGHARS HGSTPALIRA AAAASSPASP RGHSGGRKPA RPPSLQSTLW PLGHPGTLLV PEIERWAAKP GNRLRHVELE
101: RIVKELRKRR RHRQALEVSE WMNAKGHVKF LPKDHAVHLD LIGEIHGSSA AETYFNNLPD KDKTEKPYGA LLNCYTRELL VEKSLAHFQK MKELGFVFST
201: LPYNNIMGLY TNLGQHEKVP SVIAEMKSNG IVPDNFSYRI CINSYGTRAD FFGMENTLEE MECEPKIVVD WNTYAVVASN YIKGNIREKA FSALKKAEAK
301: INIKDSDSYN HLISLYGHLG DKSEVNRLWA LQMSNCNRHI NKDYTTMLAV LVKLNEIEEA EVLLKEWESS GNAFDFQVPN VLLTGYRQKD LLDKAEALLD
401: DFLKKGKMPP STSWAIVAAG YAEKGDAAKA YELTKNALCV YAPNTGWIPR PGMIEMILKY LGDEGDVEEV EIFVDLLKVA VPLNSDMTDA LSRARMREEK
501: KVKDAV

Best Arabidopsis Sequence Match ( AT4G21705.1 )
(BLAST)

001: MNILRRIPAN LIASRYYYTN RVKKTTLYSK ISPLGDPKSS VYPELQNWVQ CGKKVSVAEL IRIVHDLRRR KRFLHALEVS KWMNETGVCV FSPTEHAVHL
101: DLIGRVYGFV TAEEYFENLK EQYKNDKTYG ALLNCYVRQQ NVEKSLLHFE KMKEMGFVTS SLTYNNIMCL YTNIGQHEKV PKVLEEMKEE NVAPDNYSYR
201: ICINAFGAMY DLERIGGTLR DMERRQDITM DWNTYAVAAK FYIDGGDCDR AVELLKMSEN RLEKKDGEGY NHLITLYARL GKKIEVLRLW DLEKDVCKRR
301: INQDYLTVLQ SLVKIDALVE AEEVLTEWKS SGNCYDFRVP NTVIRGYIGK SMEEKAEAML EDLARRGKAT TPESWELVAT AYAEKGTLEN AFKCMKTALG
401: VEVGSRKWRP GLTLVTSVLS WVGDEGSLKE VESFVASLRN CIGVNKQMYH ALVKADIREG GRNIDTLLQR MKDDKIEIDE ETTVILSTRS PC

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.