Factsheet for Os01t0301700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G583500.1	Wheat	mitochondrion	54.96	57.71
TraesCS2A01G552100.1	Wheat	mitochondrion	56.75	52.0
TraesCS2D01G553100.1	Wheat	mitochondrion	55.95	51.74
VIT_07s0005g01630.t01	Wine grape	mitochondrion	34.52	36.86
PGSC0003DMT400023279	Potato	mitochondrion	35.12	35.76
Os01t0301000-01	Rice	mitochondrion	35.71	34.48
VIT_14s0060g01120.t01	Wine grape	cytosol, mitochondrion	33.53	33.94
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	31.94	33.2
KRH31780	Soybean	mitochondrion	31.15	32.98
KRH69203	Soybean	cytosol	25.0	32.39
Bra000902.1-P	Field mustard	mitochondrion	32.14	32.34
CDX90962	Canola	mitochondrion	32.14	32.34
AT4G01990.1	Thale cress	mitochondrion	32.14	32.27
CDX91822	Canola	mitochondrion	31.55	31.8
Bra033321.1-P	Field mustard	mitochondrion	31.94	31.26
CDX89976	Canola	mitochondrion	31.75	31.07
CDY15237	Canola	mitochondrion	31.35	30.8
Os04t0320200-01	Rice	mitochondrion	31.75	30.53
PGSC0003DMT400007271	Potato	mitochondrion	29.17	30.43
Solyc01g100580.2.1	Tomato	mitochondrion	28.77	30.08
AT1G02370.1	Thale cress	mitochondrion	31.94	29.98
Os01t0301500-01	Rice	cytosol, mitochondrion	28.57	29.75
Os07t0598500-01	Rice	mitochondrion	27.98	27.87
Os10t0501300-01	Rice	mitochondrion	27.18	26.71
Os10t0501000-01	Rice	cytosol	23.02	25.72
Os04t0544400-00	Rice	plastid	25.79	25.44
Os04t0450200-01	Rice	cytosol	14.29	24.66
Os12t0527900-01	Rice	mitochondrion	25.0	24.51
Os02t0796400-00	Rice	mitochondrion	24.6	23.98
Os10t0501200-00	Rice	mitochondrion	27.58	22.2
Os01t0280400-00	Rice	mitochondrion	20.44	16.86
Os12t0170100-01	Rice	mitochondrion	20.04	16.53
Os07t0222700-01	Rice	mitochondrion	3.17	8.08

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4325785	EMBL:AK100563	ProteinID:BAB60950.1	ProteinID:BAF04738.1
ProteinID:BAS71722.1	ProteinID:EAZ11577.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451
GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990
EnsemblPlantsGene:Os01g0301700	EnsemblPlants:Os01t0301700-01	PFAM:PF01535	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF942
InterPro:Pentatricopeptide_repeat	UniProt:Q94CZ7	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000A56C0
RefSeq:XP_015625445.1	SEG:seg	:	:	:	:

Description

Tetratricopeptide-like helical domain containing protein. (Os01t0301700-01);Hypothetical conserved gene. (Os01t0301700-02)

Coordinates

chr1:-:11089065..11093987

Molecular Weight (calculated)

58746.8 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.493

Length

504 amino acids

Sequence
(BLAST)

001: MLRAAATAAL RRLPQSQAPR RQARGLQYAS PERRPLDGAR WALYARLSAH LPSGGMVEEL GRWLRERRPL SEEQVLFCVR RFRKFKQNKH ALQLMDWMEA
101: RGVNLELKHH ALRLDLVSKL NGIHAAEEYF GSLPDIFRSK QTYSTLLNCY AEHRMAEKGL ELYENMKAMN IVSDILVYNN LMCLYLKTDQ PEKIPTTVVK
201: MQESGIQPNK FSYFVLTESY IMMNDIESAE KVLKELQEVN SVPWSLYATL ANGYNKLQQF DKAEFTLKKA EEVLDKHDVF SWHCLLSHYA NSGNLSEVKR
301: IWESLKSAFK KCTNRSYLVM LKALKKLDDF DTLQQIFQEW ESSHEHYDMK IPNIIIQAYL DKGMVDKAEA MRQTTMAQDH SNYRTFCIFA EFYLEKSKMN
401: EALQVWKDAK KMVKGQDWVP EKLVNRYLKH FEDSKDVDGM ETFCECLKNL GRLDAEAYEA LIRTYISVGR TNPSIPQRME VDRVDIRPEM FESLKAISTE
501: GVES

Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)

001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.