CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1
vacuole 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69203	Soybean	cytosol	73.95	90.49
VIT_07s0005g01630.t01	Wine grape	mitochondrion	51.05	51.48
PGSC0003DMT400023279	Potato	mitochondrion	49.16	47.27
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	45.59	44.74
Bra033321.1-P	Field mustard	mitochondrion	45.8	42.33
CDX89976	Canola	mitochondrion	45.17	41.75
CDY15237	Canola	mitochondrion	44.75	41.52
AT1G02370.1	Thale cress	mitochondrion	46.01	40.78
Bra000902.1-P	Field mustard	mitochondrion	42.44	40.32
CDX90962	Canola	mitochondrion	42.23	40.12
AT4G01990.1	Thale cress	mitochondrion	42.23	40.04
CDX91822	Canola	mitochondrion	42.02	40.0
GSMUA_Achr11P...	Banana	mitochondrion	39.08	35.84
KRH45616	Soybean	nucleus	36.55	35.51
EES02848	Sorghum	mitochondrion	38.24	34.34
Zm00001d009122_P001	Maize	mitochondrion	36.97	34.17
Os01t0301000-01	Rice	mitochondrion	36.34	33.14
TraesCS2B01G584000.2	Wheat	mitochondrion	38.03	32.73
KRG99413	Soybean	cytosol, mitochondrion	23.95	32.48
TraesCS6B01G118900.1	Wheat	cytosol	28.36	32.45
TraesCS2A01G552700.1	Wheat	mitochondrion	37.18	32.12
TraesCS2D01G553300.1	Wheat	mitochondrion	37.6	31.96
TraesCS6A01G091100.1	Wheat	mitochondrion	33.82	31.76
TraesCS2B01G583500.1	Wheat	mitochondrion	31.93	31.67
TraesCS6D01G079300.1	Wheat	mitochondrion	33.4	31.24
Os01t0301700-01	Rice	mitochondrion	32.98	31.15
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	32.56	30.94
TraesCS6B01G119100.1	Wheat	mitochondrion	32.14	30.91
TraesCS6B01G119000.1	Wheat	mitochondrion	31.09	30.9
TraesCS6D01G079100.1	Wheat	mitochondrion	31.09	30.9
TraesCS6A01G091200.2	Wheat	cytosol	23.32	30.41
TraesCS6A01G091000.1	Wheat	mitochondrion	32.56	30.39
TraesCS6A01G090900.1	Wheat	mitochondrion	30.46	30.27
Os01t0301500-01	Rice	cytosol, mitochondrion	30.25	29.75
TraesCS6A01G090800.2	Wheat	mitochondrion	30.04	29.67
KRH10858	Soybean	mitochondrion	30.04	29.42
HORVU6Hr1G016360.7	Barley	mitochondrion	30.88	29.4
HORVU6Hr1G016390.10	Barley	plastid	34.24	29.32
TraesCS6D01G079200.1	Wheat	plastid	33.19	29.21
TraesCS2A01G552100.1	Wheat	mitochondrion	33.4	28.91
TraesCS2D01G553100.1	Wheat	mitochondrion	32.56	28.44
KRH66454	Soybean	plastid	32.14	27.57
KRH48889	Soybean	plastid	31.51	27.47
KRH55328	Soybean	plastid	28.36	27.44
TraesCS6D01G079400.1	Wheat	plastid	25.42	26.83
KRH26940	Soybean	cytosol	27.52	26.41
KRH22399	Soybean	cytosol	25.42	25.42
KRH10583	Soybean	mitochondrion	20.59	24.56
KRH43872	Soybean	mitochondrion	19.96	24.05
KRH52991	Soybean	mitochondrion	24.58	23.59
KRH66764	Soybean	cytosol	18.07	20.72
KRH62276	Soybean	mitochondrion	24.79	20.52
KRH69049	Soybean	mitochondrion	23.74	18.55
KRH31614	Soybean	mitochondrion	22.69	18.0
KRH23068	Soybean	mitochondrion	18.07	16.96
KRH10262	Soybean	mitochondrion	17.86	16.77
KRG95098	Soybean	mitochondrion	21.22	16.56

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100781679	MapMan:35.1	EMBL:ACUP02006086	EnsemblPlantsGene:GLYMA_10G011800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
UniProt:I1L7N5	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH31780	ProteinID:KRH31780	ProteinID:KRH31780.1
PFAM:PF01535	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF504	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023C8F14	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:1101957..1103686

Molecular Weight (calculated)

54628.7 Da

IEP (calculated)

6.839

GRAVY (calculated)

-0.396

Length

476 amino acids

Sequence
(BLAST)

001: MNYARLISGG GWLLRRLCTA AETPAKKPNL YRMLSALDIT GGTVSQTLDQ YIMEGKVIKK PELERCVEQL RKYRRFQHAL EIIEWMEIRK VNFSWSNYAV
101: QLDLVSKTKG VDAAENFFGG LPPPAKNRYT YGALLNCYCK ELMKDKALSH FDTMDELGYV TNLAFNNVMT LFMKLGEPQK VPQLVELMKK RTIPMSPFTY
201: HIWMNSCASS NDLGGAERVY EEMKTENEGQ IGWHTYSNLA SIYVKFKDFE KAEMMLKMLE EQVKPKQRDA YHCLLGLYAG TGNLGEVHRV WDSLKSVSPV
301: TNFSYLVMLS TLRRLNDMEG LTKCFKEWEA SCVSYDARLV SVCVSAHLNQ NMLEEAELVF EEASRRSKGP FFRVREEFMK FFLKKHELDA AVRHLEAALS
401: EVKGDKWRPS PQVVGAFLKY YEEETDVDGV DELSKILKAN NFDDSWIKSC ITASKSSPEI DPGMKEDSQV YHAQEN

Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)

001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.