Factsheet for TraesCS2B01G584000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G552700.1	Wheat	mitochondrion	95.66	96.01
TraesCS2D01G553300.1	Wheat	mitochondrion	96.2	95.0
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	73.6	81.24
Os01t0301000-01	Rice	mitochondrion	70.16	74.33
Zm00001d009122_P001	Maize	mitochondrion	68.9	73.98
EES02848	Sorghum	mitochondrion	68.72	71.7
GSMUA_Achr11P...	Banana	mitochondrion	51.36	54.72
Os01t0301500-01	Rice	cytosol, mitochondrion	47.56	54.34
VIT_07s0005g01630.t01	Wine grape	mitochondrion	37.79	44.28
PGSC0003DMT400023279	Potato	mitochondrion	37.43	41.82
TraesCS2B01G583500.1	Wheat	mitochondrion	34.72	40.0
TraesCS6B01G118900.1	Wheat	cytosol	29.84	39.66
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	34.36	39.18
CDY15237	Canola	mitochondrion	36.17	38.99
Bra033321.1-P	Field mustard	mitochondrion	35.8	38.45
CDX89976	Canola	mitochondrion	35.62	38.25
KRH31780	Soybean	mitochondrion	32.73	38.03
CDX90962	Canola	mitochondrion	34.18	37.72
CDX91822	Canola	mitochondrion	34.0	37.6
TraesCS6B01G119100.1	Wheat	mitochondrion	33.63	37.58
VIT_14s0060g01120.t01	Wine grape	cytosol, mitochondrion	33.82	37.55
Bra000902.1-P	Field mustard	mitochondrion	34.0	37.52
KRH69203	Soybean	cytosol	26.22	37.28
AT4G01990.1	Thale cress	mitochondrion	33.82	37.25
TraesCS6B01G119000.1	Wheat	mitochondrion	31.83	36.74
AT1G02370.1	Thale cress	mitochondrion	35.44	36.5
Solyc01g100580.2.1	Tomato	mitochondrion	28.75	32.99
PGSC0003DMT400007271	Potato	mitochondrion	28.57	32.71
TraesCS1B01G188200.1	Wheat	mitochondrion	28.03	31.5
TraesCS1B01G188100.1	Wheat	mitochondrion	27.49	29.75
TraesCS5B01G104900.1	Wheat	mitochondrion	26.94	29.22
TraesCS2B01G410100.1	Wheat	plastid	26.22	28.54
TraesCS2B01G336200.1	Wheat	mitochondrion	20.43	26.97
TraesCS6B01G391300.1	Wheat	mitochondrion	24.95	26.74
TraesCS3B01G220600.2	Wheat	mitochondrion	22.42	20.23
TraesCS7B01G189100.1	Wheat	mitochondrion	16.82	18.13

Protein Annotations

EnsemblPlants:TraesCS2B01G584000.2	EnsemblPlantsGene:TraesCS2B01G584000	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF504
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:771184999..771187695

Molecular Weight (calculated)

61801.5 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.476

Length

553 amino acids

Sequence
(BLAST)

001: MAALTPSAGA RLLRRLLSTA AEVAREAAPA AAKNPKKAAA RPVRKRAARA VAPQDAKEAA PPAAEAAPDA EGAKKAAAAA GTKDSRPLYR RLSALGNARE
101: GSVSAVLNKW LREGRETRSV DLERYVKELR RYKRHSHALE LMDWMVHTKG MNMSYTNHAI RLDLIYKVRG IEAAEKYFDG LPDPAKNHRT YGALLNCYCS
201: SKKEEKATDL YRKMDELGIS SSTLPINNLM SLYMKLGQHK KVCSLFEEMK EKNVKPDNLT CCILMTSCAA LNKIDDVEQV LKEMEEKGGV LGWSAYSTLA
301: SIYQSAGLVE KAESALKKLE GLVQDRDGRQ PFDFLMSLYA SVGNLSEVKR VWGVVKGTFP KVTNTSYFSM LQALLKLNDA DYMKQVFEEW ESNHECYDVK
401: LTNVMTRAHL RNDMAKEAEQ LWEKAKEMGA CFDSKTCELF LDHYMGTGDM KSALNWVENV TKLPKKAGKL DPDKVPKFSK YFEEQKDVQG AEGFCCCLRA
501: LGCIDGKAYE SLLRTYLAAG ETSRSLRQQI KDDKVEICYD IGKLLKRLGD KGR

Best Arabidopsis Sequence Match ( AT4G01990.1 )
(BLAST)

001: MMHSVSRLAR RFCATLATAT AEISGEAAAS VPTKAKKHRS IYKKLSSLGT RGGGKMEETL NQFVMEGVPV KKHDLIRYAK DLRKFRQPQR ALEIFEWMER
101: KEIAFTGSDH AIRLNLIAKS KGLEAAETYF NSLDDSIKNQ STYGSLLNCY CVEKEEVKAK AHFENMVDLN HVSNSLPFNN LMAMYMGLGQ PEKVPALVVA
201: MKEKSITPCD ITYSMWIQSC GSLKDLDGVE KVLDEMKAEG EGIFSWNTFA NLAAIYIKVG LYGKAEEALK SLENNMNPDV RDCYHFLINL YTGIANASEV
301: YRVWDLLKKR YPNVNNSSYL TMLRALSKLD DIDGVKKVFA EWESTCWTYD MRMANVAISS YLKQNMYEEA EAVFNGAMKK CKGQFSKARQ LLMMHLLKND
401: QADLALKHFE AAVLDQDKNW TWSSELISSF FLHFEEAKDV DGAEEFCKTL TKWSPLSSET YTLLMKTYLA AGKACPDMKK RLEEQGILVD EEQECLLSKI
501: CP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g01990, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93WC5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.