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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89976 Canola mitochondrion 96.3 95.92
Bra033321.1-P Field mustard mitochondrion 96.1 95.73
AT1G02370.1 Thale cress mitochondrion 82.46 78.77
CDX90962 Canola mitochondrion 59.65 61.08
CDX91822 Canola mitochondrion 58.87 60.4
VIT_07s0005g01630.t01 Wine grape mitochondrion 46.0 50.0
PGSC0003DMT400023279 Potato mitochondrion 45.81 47.47
Solyc01g079320.2.1 Tomato cytosol, mitochondrion 43.08 45.57
KRH31780 Soybean mitochondrion 41.52 44.75
KRH69203 Soybean cytosol 32.16 42.42
GSMUA_Achr11P... Banana mitochondrion 39.96 39.5
EES02848 Sorghum mitochondrion 38.21 36.98
Zm00001d009122_P001 Maize mitochondrion 37.04 36.89
CDY24553 Canola mitochondrion 20.47 36.46
TraesCS2A01G552700.1 Wheat mitochondrion 38.99 36.3
TraesCS2B01G584000.2 Wheat mitochondrion 38.99 36.17
CDX96239 Canola mitochondrion 34.5 36.05
TraesCS2B01G583500.1 Wheat mitochondrion 33.72 36.04
TraesCS2D01G553300.1 Wheat mitochondrion 39.18 35.89
Os01t0301000-01 Rice mitochondrion 36.45 35.82
CDY34141 Canola mitochondrion 34.31 35.77
CDY46999 Canola mitochondrion 34.11 35.64
HORVU2Hr1G120330.4 Barley endoplasmic reticulum, extracellular 34.7 35.53
TraesCS6B01G118900.1 Wheat cytosol 28.46 35.1
CDY50358 Canola cytosol 15.79 34.47
CDY50357 Canola mitochondrion 13.26 34.0
CDY24554 Canola cytosol 10.14 33.99
TraesCS6A01G091100.1 Wheat mitochondrion 33.14 33.53
Os01t0301500-01 Rice cytosol, mitochondrion 31.58 33.47
TraesCS6A01G091000.1 Wheat mitochondrion 33.14 33.33
TraesCS6D01G079300.1 Wheat mitochondrion 32.94 33.2
TraesCS6B01G119100.1 Wheat mitochondrion 31.58 32.73
TraesCS6D01G079200.1 Wheat plastid 34.31 32.53
TraesCS6D01G079100.1 Wheat mitochondrion 30.21 32.36
TraesCS2A01G552100.1 Wheat mitochondrion 34.31 32.0
TraesCS2D01G553100.1 Wheat mitochondrion 33.72 31.74
TraesCS6A01G090800.2 Wheat mitochondrion 29.82 31.74
TraesCS6A01G090900.1 Wheat mitochondrion 29.43 31.52
Os01t0301700-01 Rice mitochondrion 30.8 31.35
TraesCS6B01G119000.1 Wheat mitochondrion 29.24 31.32
TraesCS6A01G091200.2 Wheat cytosol 22.03 30.96
HORVU6Hr1G016390.10 Barley plastid 33.14 30.58
HORVU6Hr1G016360.7 Barley mitochondrion 29.04 29.8
CDX98698 Canola mitochondrion 27.88 29.3
CDX90079 Canola mitochondrion 28.66 28.71
CDY15126 Canola cytosol, mitochondrion, plastid 28.66 28.71
CDY19721 Canola mitochondrion 26.32 28.3
CDX99984 Canola mitochondrion 26.12 28.03
CDX91277 Canola mitochondrion 28.27 27.94
TraesCS6D01G079400.1 Wheat plastid 24.17 27.49
CDX97288 Canola mitochondrion 27.49 27.43
CDY25035 Canola mitochondrion, plastid 26.12 27.35
CDY03299 Canola mitochondrion 24.76 26.85
CDY35213 Canola cytosol 2.14 26.83
CDY39781 Canola mitochondrion 24.95 26.78
CDY05574 Canola mitochondrion 27.1 26.53
CDY65573 Canola mitochondrion 18.91 26.22
CDY44801 Canola mitochondrion 19.69 25.0
CDY35212 Canola mitochondrion 13.65 24.91
CDY27645 Canola mitochondrion 10.92 21.62
CDY71968 Canola plastid 11.89 20.89
CDY05786 Canola plastid 19.69 20.82
CDY31943 Canola plastid 19.69 20.82
CDX94049 Canola cytosol 28.27 20.66
CDY09903 Canola mitochondrion 20.08 19.43
CDY06272 Canola mitochondrion 19.88 19.25
CDY57695 Canola mitochondrion 22.03 18.74
CDY48421 Canola mitochondrion 14.23 17.68
CDY00734 Canola mitochondrion 6.04 17.51
CDY36566 Canola mitochondrion 20.47 17.47
CDY39654 Canola mitochondrion 20.47 17.47
CDY27647 Canola mitochondrion 13.45 16.95
CDX97686 Canola plastid 18.91 15.65
CDY30088 Canola plastid 18.32 15.23
CDY53325 Canola mitochondrion 18.52 13.61
CDY53324 Canola mitochondrion, plastid 19.3 13.54
CDX73880 Canola mitochondrion 12.87 13.17
CDX79395 Canola cytosol 22.42 11.22
CDY66759 Canola cytosol 15.98 10.98
CDY36565 Canola cytosol 0.78 1.19
Protein Annotations
EnsemblPlants:CDY15237EnsemblPlantsGene:GSBRNA2T00085433001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF504
PFAM:PF01535PFAM:PF13041PFscan:PS51375ProteinID:CDY15237ProteinID:CDY15237.1SEG:seg
SUPFAM:SSF48452TIGRFAMs:TIGR00756UniParc:UPI0004EF4930UniProt:A0A078FQU5MapMan:35.1:
Description
BnaC05g01160DBnaC05g01160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQU5]
Coordinates
chrLK032052:+:612868..614666
Molecular Weight (calculated)
58323.2 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.375
Length
513 amino acids
Sequence
(BLAST)
001: MNFRNLIASG SRLGKRFCAT VFSPASSAGV VEASVSAPPT AASRQREIYK KLSKLSVTGG TVTQTLNQFI MEGTPVRKDD LFRCAKDLRK FRRHQHALEI
101: FDWMEKRKMT LSIADHAIRL DLIAKTKGLE AAESYFNGLD PSTKSHQSTY GALMNCYCVE LKEEKAKAHF EEMDELNFVN NTLPFNNMMS MYMRLGQPEK
201: VSLLVDEMKR REISPCGITY SIWMQSCGSL NDLEGLEKVI DEMNKDSEAK TTWNTFSSLA GIYTKAGLHE KAESALRTME EKMNPNNRDA HHFLISLYAG
301: ISKASEVERV WEALKKARPE VNNISYLVML QALSKLGDID GVKRVFTEWE SKCYAYDMRL ANIAINAYLK GGMYREAEMI LEGALKKCKG PFSKSRQLLM
401: VHLLEKGEAG VAMKHLEAAA SDFEEKKDEE WSWSSELVSL FFIHFEKAKD VEGAEELCRI LSKWRPLDPE TVTFLIKTYA AAEKTCPDMR ERLFREQIEV
501: SEEIQDLLET VCP
Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)
001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.