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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011054.1-P Field mustard mitochondrion 100.0 12.02
CDY65573 Canola mitochondrion 100.0 11.08
CDY71968 Canola plastid 43.9 6.16
Solyc07g054100.1.1 Tomato cytosol 41.46 5.26
PGSC0003DMT400047256 Potato extracellular 36.59 4.64
CDY50358 Canola cytosol 24.39 4.26
CDY03299 Canola mitochondrion 41.46 3.59
CDY39781 Canola mitochondrion 41.46 3.56
Solyc07g054090.2.1 Tomato cytosol, mitochondrion, plastid 41.46 3.45
PGSC0003DMT400047255 Potato cytosol, mitochondrion, plastid 41.46 3.41
KRH22399 Soybean cytosol 39.02 3.36
KRH26940 Soybean cytosol 39.02 3.23
VIT_12s0028g03870.t01 Wine grape cytosol, mitochondrion 36.59 3.01
Os10t0501000-01 Rice cytosol 31.71 2.88
CDX98698 Canola mitochondrion 34.15 2.87
CDY53325 Canola mitochondrion 48.78 2.87
CDX73880 Canola mitochondrion 34.15 2.79
TraesCS1B01G188200.1 Wheat mitochondrion 31.71 2.64
GSMUA_Achr5P20750_001 Banana mitochondrion 34.15 2.56
CDY25035 Canola mitochondrion, plastid 29.27 2.45
TraesCS1D01G166700.1 Wheat mitochondrion 29.27 2.42
CDX90079 Canola mitochondrion 29.27 2.34
CDY15126 Canola cytosol, mitochondrion, plastid 29.27 2.34
Os10t0501300-01 Rice mitochondrion 29.27 2.34
CDX97288 Canola mitochondrion 29.27 2.33
CDY53324 Canola mitochondrion, plastid 41.46 2.33
CDX91277 Canola mitochondrion 29.27 2.31
CDY19721 Canola mitochondrion 26.83 2.31
CDX99984 Canola mitochondrion 26.83 2.3
CDY05574 Canola mitochondrion 29.27 2.29
TraesCS1A01G168700.1 Wheat mitochondrion 31.71 2.23
CDY15237 Canola mitochondrion 26.83 2.14
CDX96239 Canola mitochondrion 24.39 2.04
CDY46999 Canola mitochondrion 24.39 2.04
CDY66759 Canola cytosol 36.59 2.01
CDX91822 Canola mitochondrion 24.39 2.0
CDX90962 Canola mitochondrion 24.39 2.0
CDX94049 Canola cytosol 34.15 1.99
CDY24554 Canola cytosol 7.32 1.96
OQU91552 Sorghum mitochondrion 24.39 1.96
CDX89976 Canola mitochondrion 24.39 1.94
Zm00001d032543_P001 Maize mitochondrion 24.39 1.93
Os10t0501200-00 Rice mitochondrion 29.27 1.92
CDY34141 Canola mitochondrion 21.95 1.83
CDY44801 Canola mitochondrion 17.07 1.73
CDY06272 Canola mitochondrion 21.95 1.7
CDY09903 Canola mitochondrion 21.95 1.7
CDY48421 Canola mitochondrion 17.07 1.69
CDY30088 Canola plastid 19.51 1.3
CDX97686 Canola plastid 19.51 1.29
CDY31943 Canola plastid 14.63 1.24
CDY05786 Canola plastid 14.63 1.24
CDY27647 Canola mitochondrion 12.2 1.23
CDY35212 Canola mitochondrion 7.32 1.07
CDY36566 Canola mitochondrion 12.2 0.83
CDY39654 Canola mitochondrion 12.2 0.83
CDY57695 Canola mitochondrion 12.2 0.83
CDY36565 Canola cytosol 4.88 0.6
CDX79395 Canola cytosol 14.63 0.59
CDY27645 Canola mitochondrion 0.0 0.0
CDY24553 Canola mitochondrion 0.0 0.0
CDY50357 Canola mitochondrion 0.0 0.0
CDY00734 Canola mitochondrion 0.0 0.0
AT1G43010.1 Thale cress mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:CDY35213EnsemblPlantsGene:GSBRNA2T00058121001ProteinID:CDY35213ProteinID:CDY35213.1UniParc:UPI0004EB0F08UniProt:A0A078HEI3
MapMan:35.2:::::
Description
BnaA01g08180DBnaA01g08180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEI3]
Coordinates
chrLK032348:+:150478..155320
Molecular Weight (calculated)
4663.6 Da
IEP (calculated)
4.792
GRAVY (calculated)
-0.280
Length
41 amino acids
Sequence
(BLAST)
1: MEGAEVIYRE WELGGLPFDA SIPNTLISGY HALGMERRLR N
Best Arabidopsis Sequence Match ( AT3G11380.1 )
(BLAST)
001: MSMRHNLQRH AKRILAYSNR PRFFCSYTNV TLSSPATNQT LQSRIEAASH QKAEITTVLE QWLQQQQQQG KQLNPSLLRG IVEKLRSSNR PRQALEVSDW
101: MVEQKMYNLP EDFSARFHLT EKVLNLEEAE KFFESIPENM RFESMYNSLL RSYARQSGEK ALKKAESVFK KMKKLGLLLR PSPYNSMTSL YSSLGNRDKV
201: DEILREMKEN NVELDNVTVN NALRVYAAVS DVATMDKFLA DRKEITRLDG LTMLAMAKAY ELMSLYGEAG EIEDVHRVWD KYKATRQKDN EEFRTLIGSL
301: LKLGDTKGAE KIYYNEWECS GLEFDNRIPD MLVSGYREKG MVMKADKLVN KTLWIRGLAT PITLLLEEMD KKGNKVSPPG LRDLIKNLRD SNQLSKALEA
401: STWMCQKKVF NLFSEDYATR LHLTEKVLGL EEAENFFESS IPENMKDYSV YDTLLSCYAR SSNTQSKAEA VFEKMRELGL QSKLSPFNSL ISLYSGQGKL
501: SVVNILLCDM KHKNIEPDIV TRNNVLRANA YILAIDSMEK V
Arabidopsis Description
Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAY6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.