Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57695 | Canola | mitochondrion | 56.2 | 95.52 |
| AT1G80270.2 | Thale cress | mitochondrion | 49.27 | 84.73 |
| CDY36566 | Canola | mitochondrion | 37.85 | 64.56 |
| CDY39654 | Canola | mitochondrion | 37.37 | 63.73 |
| KRH66764 | Soybean | cytosol | 22.93 | 56.63 |
| VIT_08s0007g05090.t01 | Wine grape | mitochondrion | 32.98 | 54.17 |
| KRH69049 | Soybean | mitochondrion | 31.8 | 53.53 |
| GSMUA_Achr5P27560_001 | Banana | cytosol | 25.95 | 51.85 |
| KRH31614 | Soybean | mitochondrion | 30.24 | 51.67 |
| GSMUA_Achr8P21680_001 | Banana | mitochondrion | 30.93 | 51.29 |
| PGSC0003DMT400022632 | Potato | mitochondrion | 31.02 | 50.96 |
| Solyc12g020050.1.1 | Tomato | plastid | 30.83 | 50.64 |
| KRG95098 | Soybean | mitochondrion | 29.66 | 49.84 |
| TraesCS3D01G195000.1 | Wheat | mitochondrion | 27.8 | 46.49 |
| TraesCS3B01G220600.2 | Wheat | mitochondrion | 27.71 | 46.33 |
| HORVU3Hr1G040710.1 | Barley | mitochondrion | 27.51 | 46.08 |
| TraesCS3A01G191200.1 | Wheat | mitochondrion | 27.41 | 45.91 |
| PGSC0003DMT400021596 | Potato | mitochondrion | 27.41 | 45.84 |
| OQU86720 | Sorghum | mitochondrion | 27.02 | 45.19 |
| Zm00001d008224_P002 | Maize | mitochondrion | 27.32 | 45.02 |
| Os12t0170100-01 | Rice | mitochondrion | 26.54 | 44.52 |
| GSMUA_Achr11P... | Banana | mitochondrion | 27.22 | 44.43 |
| Os01t0280400-00 | Rice | mitochondrion | 26.24 | 44.03 |
| Zm00001d040475_P001 | Maize | mitochondrion | 26.24 | 43.88 |
| CDX97686 | Canola | plastid | 24.78 | 40.97 |
| CDY30088 | Canola | plastid | 24.49 | 40.68 |
| CDY24553 | Canola | mitochondrion | 7.8 | 27.78 |
| CDY39781 | Canola | mitochondrion | 11.61 | 24.9 |
| CDY35212 | Canola | mitochondrion | 6.73 | 24.56 |
| CDY03299 | Canola | mitochondrion | 11.32 | 24.52 |
| CDX96239 | Canola | mitochondrion | 11.61 | 24.24 |
| CDY34141 | Canola | mitochondrion | 11.61 | 24.19 |
| CDX91277 | Canola | mitochondrion | 12.2 | 24.08 |
| CDY46999 | Canola | mitochondrion | 11.51 | 24.03 |
| CDY50357 | Canola | mitochondrion | 4.68 | 24.0 |
| CDX98698 | Canola | mitochondrion | 11.41 | 23.98 |
| CDX91822 | Canola | mitochondrion | 11.61 | 23.8 |
| CDX97288 | Canola | mitochondrion | 11.9 | 23.74 |
| CDY00734 | Canola | mitochondrion | 4.1 | 23.73 |
| CDX99984 | Canola | mitochondrion | 11.02 | 23.64 |
| CDY65573 | Canola | mitochondrion | 8.49 | 23.51 |
| CDX90962 | Canola | mitochondrion | 11.41 | 23.35 |
| CDY25035 | Canola | mitochondrion, plastid | 11.12 | 23.27 |
| CDX89976 | Canola | mitochondrion | 11.41 | 22.72 |
| CDY19721 | Canola | mitochondrion | 10.54 | 22.64 |
| CDY09903 | Canola | mitochondrion | 11.71 | 22.64 |
| CDY06272 | Canola | mitochondrion | 11.61 | 22.45 |
| CDY15237 | Canola | mitochondrion | 11.22 | 22.42 |
| CDY27645 | Canola | mitochondrion | 5.56 | 22.01 |
| CDY05574 | Canola | mitochondrion | 11.12 | 21.76 |
| CDY44801 | Canola | mitochondrion | 8.29 | 21.04 |
| CDY71968 | Canola | plastid | 5.85 | 20.55 |
| CDY24554 | Canola | cytosol | 3.02 | 20.26 |
| CDY50358 | Canola | cytosol | 4.59 | 20.0 |
| CDX90079 | Canola | mitochondrion | 9.95 | 19.92 |
| CDY15126 | Canola | cytosol, mitochondrion, plastid | 9.76 | 19.53 |
| CDY05786 | Canola | plastid | 8.88 | 18.76 |
| CDY31943 | Canola | plastid | 8.88 | 18.76 |
| CDX94049 | Canola | cytosol | 12.0 | 17.52 |
| CDY27647 | Canola | mitochondrion | 6.83 | 17.2 |
| CDY48421 | Canola | mitochondrion | 6.44 | 15.98 |
| CDY35213 | Canola | cytosol | 0.59 | 14.63 |
| CDY53325 | Canola | mitochondrion | 8.98 | 13.18 |
| CDY53324 | Canola | mitochondrion, plastid | 9.07 | 12.72 |
| CDY66759 | Canola | cytosol | 9.17 | 12.58 |
| CDX73880 | Canola | mitochondrion | 5.95 | 12.18 |
| CDY36565 | Canola | cytosol | 1.56 | 4.78 |
Protein Annotations
| Gene3D:1.20.120.1900 | Gene3D:1.25.40.10 | MapMan:16.12.5.4.19 | MapMan:20.1.2.1.5 | GO:A0A078CRD1 | EnsemblPlants:CDX79395 |
| ProteinID:CDX79395 | ProteinID:CDX79395.1 | ncoils:Coil | InterPro:GCP | GO:GO:0000226 | GO:GO:0000922 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005815 | GO:GO:0005856 | GO:GO:0007020 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0043015 | GO:GO:0090063 | EnsemblPlantsGene:GSBRNA2T00132103001 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 |
| PFAM:PF04130 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF26 | InterPro:Pentatricopeptide_repeat |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EE26E5 | SEG:seg | : | : |
Description
BnaC06g19080D
Coordinates
chrLK031817:-:1837700..1842526
Molecular Weight (calculated)
116707.0 Da
IEP (calculated)
7.888
GRAVY (calculated)
-0.444
Length
1025 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLNSADSLV VSISRKCCLD KDKDDKSNVI PLSSIRKSRP NNFGIDCLES LKFTYKVPWP LELIANSEAI KKYNQVMGFL LKVNREKYVL DKAWRWMWKG
0101: KGSAAKIRKH HWLLEQKLLS FVDAFHQYVM DRVYHTAWRE LCEAMAKAGS LEEVIYVHET YLLSIQRQCF VVQEKLTLSS GGAASTIEAR CEMEIEHIEK
0201: QFEDCIAFLL RVLSSKLNVG HFPHLADLVT RINYNYHYMP DTGSSISASG AETKSSRTLS AKSDHPKLGV ISRADVLSWV SSSRCSGFER PDLLSYGLCV
0301: GMQSISYIYP RQTKMILPDW FYFRDENCFS SNFLLQYTVR AEGFQAFSTY FKSPSGEPGV ERRLSEDKTV IPEKSVKTLN PSHFINTQLS VLISSSSLST
0401: PISHDYKNCS DRFEGPIMFA LSKVLRRSQR LRLGACTNAV YSKQEIPSGE RSFFTLQSHS FVHDQQLEPL PRVHHMSSMS KRLLSSSAGT KSDQEEDDDL
0501: EDGFSELENS KSGQESTTSS SDESDVDEGK LSADEEEELE LDLTETDDSR KTLEKKQSEL FKAIVSAGGL SVGSALDKWV EEEGNEISRT DVAKAMLQLR
0601: RRRMYGRALQ MSEWLEANKK IEMNERDYAS RLDLIVKTRG LEKGEAYVDK IPKSFRGEVM YRTLLANCVV ACNVKKSELV FNRMKDLGFP RSGFTCDQML
0701: LLYKRVDRKK ISDVLLLMEK ENVKPSLLTY KILIDVKGSS NDIKGMEQVV ETMKDEGVEP DFNTQAIIAR HYSVAGLKEK AESVLKEMEG ESLEANRRAF
0801: KDLLSIYASL GREDEVRRVW KICESKPRFE ESLSAIQAFG KLDKVQEAEE IFEKVIKMDR RVSSNTFSVL LRVYVDHKML SKGKDLVKRM AESGCRIEAS
0901: TWDALIRLYV EAGEVEKADS LLSKASKQSH TKLMMSSFMY IMDEYAKRGD VHNTEKIFQK MREVGYTSRL RQFQALMQGY SNAKAPAYGM RDRMKADNIF
1001: PNKAMAAQLA QGDPFKKTAI SDILD
0101: KGSAAKIRKH HWLLEQKLLS FVDAFHQYVM DRVYHTAWRE LCEAMAKAGS LEEVIYVHET YLLSIQRQCF VVQEKLTLSS GGAASTIEAR CEMEIEHIEK
0201: QFEDCIAFLL RVLSSKLNVG HFPHLADLVT RINYNYHYMP DTGSSISASG AETKSSRTLS AKSDHPKLGV ISRADVLSWV SSSRCSGFER PDLLSYGLCV
0301: GMQSISYIYP RQTKMILPDW FYFRDENCFS SNFLLQYTVR AEGFQAFSTY FKSPSGEPGV ERRLSEDKTV IPEKSVKTLN PSHFINTQLS VLISSSSLST
0401: PISHDYKNCS DRFEGPIMFA LSKVLRRSQR LRLGACTNAV YSKQEIPSGE RSFFTLQSHS FVHDQQLEPL PRVHHMSSMS KRLLSSSAGT KSDQEEDDDL
0501: EDGFSELENS KSGQESTTSS SDESDVDEGK LSADEEEELE LDLTETDDSR KTLEKKQSEL FKAIVSAGGL SVGSALDKWV EEEGNEISRT DVAKAMLQLR
0601: RRRMYGRALQ MSEWLEANKK IEMNERDYAS RLDLIVKTRG LEKGEAYVDK IPKSFRGEVM YRTLLANCVV ACNVKKSELV FNRMKDLGFP RSGFTCDQML
0701: LLYKRVDRKK ISDVLLLMEK ENVKPSLLTY KILIDVKGSS NDIKGMEQVV ETMKDEGVEP DFNTQAIIAR HYSVAGLKEK AESVLKEMEG ESLEANRRAF
0801: KDLLSIYASL GREDEVRRVW KICESKPRFE ESLSAIQAFG KLDKVQEAEE IFEKVIKMDR RVSSNTFSVL LRVYVDHKML SKGKDLVKRM AESGCRIEAS
0901: TWDALIRLYV EAGEVEKADS LLSKASKQSH TKLMMSSFMY IMDEYAKRGD VHNTEKIFQK MREVGYTSRL RQFQALMQGY SNAKAPAYGM RDRMKADNIF
1001: PNKAMAAQLA QGDPFKKTAI SDILD
001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
Arabidopsis Description
PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.