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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 8
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol, mitochondrion, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57695 Canola mitochondrion 83.72 82.75
Bra003559.1-P Field mustard cytosol 83.56 69.94
AT1G15480.1 Thale cress mitochondrion 64.09 64.31
KRH66764 Soybean cytosol 39.93 57.35
KRH69049 Soybean mitochondrion 54.53 53.37
VIT_08s0007g05090.t01 Wine grape mitochondrion 55.87 53.37
GSMUA_Achr5P27560_001 Banana cytosol 45.13 52.44
KRH31614 Soybean mitochondrion 51.85 51.5
PGSC0003DMT400022632 Potato mitochondrion 53.52 51.12
GSMUA_Achr8P21680_001 Banana mitochondrion 52.68 50.81
KRG95098 Soybean mitochondrion 51.51 50.33
Solyc12g020050.1.1 Tomato plastid 52.68 50.32
CDX79395 Canola cytosol 84.73 49.27
TraesCS3D01G195000.1 Wheat mitochondrion 46.64 45.35
TraesCS3B01G220600.2 Wheat mitochondrion 46.48 45.19
PGSC0003DMT400021596 Potato mitochondrion 46.31 45.02
TraesCS3A01G191200.1 Wheat mitochondrion 45.97 44.77
HORVU3Hr1G040710.1 Barley mitochondrion 45.97 44.77
Zm00001d008224_P002 Maize mitochondrion 46.64 44.69
GSMUA_Achr11P... Banana mitochondrion 46.98 44.59
OQU86720 Sorghum mitochondrion 45.64 44.37
AT3G15590.2 Thale cress cytosol, mitochondrion 44.8 43.77
Zm00001d040475_P001 Maize mitochondrion 44.46 43.23
Os12t0170100-01 Rice mitochondrion 44.3 43.21
Os01t0280400-00 Rice mitochondrion 43.79 42.72
AT1G60770.1 Thale cress cytosol 21.14 25.66
AT2G20710.1 Thale cress mitochondrion 20.3 24.69
AT5G27460.1 Thale cress cytosol, mitochondrion, plastid 19.63 23.83
AT4G21705.1 Thale cress mitochondrion 19.3 23.37
AT1G43010.1 Thale cress mitochondrion 9.73 22.57
AT4G02820.1 Thale cress mitochondrion 19.63 21.99
AT1G07590.1 Thale cress mitochondrion 18.62 20.79
AT1G02150.1 Thale cress mitochondrion 17.79 20.23
AT1G28020.1 Thale cress cytosol, plastid 16.28 19.64
AT4G01990.1 Thale cress mitochondrion 16.28 19.32
AT5G09450.1 Thale cress mitochondrion 13.09 19.07
AT1G02370.1 Thale cress mitochondrion 16.95 18.81
AT3G11380.1 Thale cress mitochondrion 16.28 17.93
AT1G28000.1 Thale cress mitochondrion 10.23 15.72
AT3G11350.1 Thale cress mitochondrion 8.89 14.76
AT2G20720.1 Thale cress cytosol 7.21 14.38
Protein Annotations
Gene3D:1.25.40.10MapMan:16.12.5.4.19EntrezGene:844367UniProt:A0A178W3Z6ProteinID:AAG52431.1ProteinID:AEE36379.1
ProteinID:AEE36380.1ProteinID:AEE36381.1EMBL:AK221194ProteinID:ANM59450.1ProteinID:ANM59451.1ArrayExpress:AT1G80270
EnsemblPlantsGene:AT1G80270RefSeq:AT1G80270TAIR:AT1G80270RefSeq:AT1G80270-TAIR-GEnsemblPlants:AT1G80270.2TAIR:AT1G80270.2
EMBL:AY062525EMBL:AY093307Unigene:At.72982ncoils:CoilGO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009451GO:GO:0009536GO:GO:0009941GO:GO:0009987
GO:GO:0016787GO:GO:0090305InterPro:IPR002885InterPro:IPR011990RefSeq:NP_001077853.1RefSeq:NP_001321806.1
RefSeq:NP_001321807.1RefSeq:NP_178143.1RefSeq:NP_974190.1ProteinID:OAP12784.1PFAM:PF01535PFAM:PF13812
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007057PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281Symbol:PPR596PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF26
InterPro:Pentatricopeptide_repeatUniProt:Q9C977TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000009E82CSEG:seg
Description
PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
Coordinates
chr1:+:30180907..30183561
Molecular Weight (calculated)
67285.9 Da
IEP (calculated)
7.793
GRAVY (calculated)
-0.486
Length
596 amino acids
Sequence
(BLAST)
001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.