Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027226.1-P | Field mustard | plastid | 77.21 | 78.24 |
| CDX97686 | Canola | plastid | 76.56 | 75.32 |
| CDY30088 | Canola | plastid | 75.57 | 74.72 |
| KRH66764 | Soybean | cytosol | 34.92 | 51.33 |
| KRH31614 | Soybean | mitochondrion | 45.9 | 46.67 |
| KRH69049 | Soybean | mitochondrion | 46.39 | 46.47 |
| GSMUA_Achr5P27560_001 | Banana | cytosol | 38.52 | 45.81 |
| AT1G80270.2 | Thale cress | mitochondrion | 43.77 | 44.8 |
| AT1G15480.1 | Thale cress | mitochondrion | 43.61 | 44.78 |
| VIT_08s0007g05090.t01 | Wine grape | mitochondrion | 45.57 | 44.55 |
| KRG95098 | Soybean | mitochondrion | 43.93 | 43.93 |
| GSMUA_Achr8P21680_001 | Banana | mitochondrion | 43.93 | 43.37 |
| Solyc12g020050.1.1 | Tomato | plastid | 43.61 | 42.63 |
| PGSC0003DMT400022632 | Potato | mitochondrion | 43.44 | 42.47 |
| TraesCS3D01G195000.1 | Wheat | mitochondrion | 41.64 | 41.44 |
| HORVU3Hr1G040710.1 | Barley | mitochondrion | 41.48 | 41.34 |
| TraesCS3B01G220600.2 | Wheat | mitochondrion | 41.48 | 41.27 |
| Os01t0280400-00 | Rice | mitochondrion | 41.31 | 41.24 |
| TraesCS3A01G191200.1 | Wheat | mitochondrion | 41.15 | 41.01 |
| Os12t0170100-01 | Rice | mitochondrion | 40.49 | 40.43 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.15 | 39.97 |
| OQU86720 | Sorghum | mitochondrion | 39.67 | 39.48 |
| PGSC0003DMT400021596 | Potato | mitochondrion | 39.67 | 39.48 |
| Zm00001d040475_P001 | Maize | mitochondrion | 39.67 | 39.48 |
| Zm00001d008224_P002 | Maize | mitochondrion | 39.18 | 38.42 |
| AT1G43010.1 | Thale cress | mitochondrion | 10.49 | 24.9 |
| AT2G20710.1 | Thale cress | mitochondrion | 19.34 | 24.08 |
| AT1G60770.1 | Thale cress | cytosol | 19.18 | 23.83 |
| AT4G21705.1 | Thale cress | mitochondrion | 18.03 | 22.36 |
| AT4G02820.1 | Thale cress | mitochondrion | 19.34 | 22.18 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 17.7 | 22.0 |
| AT1G07590.1 | Thale cress | mitochondrion | 17.38 | 19.85 |
| AT1G02150.1 | Thale cress | mitochondrion | 16.39 | 19.08 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 14.59 | 18.02 |
| AT4G01990.1 | Thale cress | mitochondrion | 14.75 | 17.93 |
| AT5G09450.1 | Thale cress | mitochondrion | 11.8 | 17.6 |
| AT3G11380.1 | Thale cress | mitochondrion | 15.57 | 17.56 |
| AT1G28000.1 | Thale cress | mitochondrion | 10.49 | 16.49 |
| AT1G02370.1 | Thale cress | mitochondrion | 14.43 | 16.39 |
| AT2G20720.1 | Thale cress | cytosol | 7.87 | 16.05 |
| AT3G11350.1 | Thale cress | mitochondrion | 8.69 | 14.76 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.5.4.19 | EntrezGene:820799 | ProteinID:AEE75696.1 | ProteinID:ANM65597.1 | ArrayExpress:AT3G15590 |
| EnsemblPlantsGene:AT3G15590 | RefSeq:AT3G15590 | TAIR:AT3G15590 | RefSeq:AT3G15590-TAIR-G | EnsemblPlants:AT3G15590.2 | EMBL:AY102108 |
| ProteinID:BAB01348.1 | EMBL:BT002636 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009451 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_001327555.1 | RefSeq:NP_188178.2 | PFAM:PF01535 | PFAM:PF13812 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF1592 | InterPro:Pentatricopeptide_repeat | UniProt:Q9LRP6 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000AC609 | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein At3g15590, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LRP6]
Coordinates
chr3:-:5275401..5277991
Molecular Weight (calculated)
69398.0 Da
IEP (calculated)
8.615
GRAVY (calculated)
-0.355
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSLSRILQR SQRYNFAPSS FGAVSKLEVS SGGDKERVFK SFGLIYSKPQ GLVRLYSARD VFSRFFGIHK LSSIADAKDK GDEVVREEEL SESEEAVPVS
101: GDVPEGVVDD DSLFEPELGS DNDDLEIEEK HSKDGGKPTK KRGQSELYES IVAYKSVKHV LEKWVKEGKD LSQAEVTLAI HNLRKRKSYA MCLQLWEWLG
201: ANTQFEFTEA NYASQLDLVA KVHSLQKAEI FLKDIPESSR GEVVYRTLLA NCVLKHHVNK AEDIFNKMKE LKFPTSVFAC NQLLLLYSMH DRKKISDVLL
301: LMERENIKPS RATYHFLINS KGLAGDITGM EKIVETIKEE GIELDPELQS ILAKYYIRAG LKERAQDLMK EIEGKGLQQT PWVCRSLLPL YADIGDSDNV
401: RRLSRFVDQN PRYDNCISAI KAWGKLKEVE EAEAVFERLV EKYKIFPMMP YFALMEIYTE NKMLAKGRDL VKRMGNAGIA IGPSTWHALV KLYIKAGEVG
501: KAELILNRAT KDNKMRPMFT TYMAILEEYA KRGDVHNTEK VFMKMKRASY AAQLMQYETV LLAYINAKTP AYGMIERMKA DNVFPNKSLA AKLAQVNPFK
601: KCPVSVLLDI
101: GDVPEGVVDD DSLFEPELGS DNDDLEIEEK HSKDGGKPTK KRGQSELYES IVAYKSVKHV LEKWVKEGKD LSQAEVTLAI HNLRKRKSYA MCLQLWEWLG
201: ANTQFEFTEA NYASQLDLVA KVHSLQKAEI FLKDIPESSR GEVVYRTLLA NCVLKHHVNK AEDIFNKMKE LKFPTSVFAC NQLLLLYSMH DRKKISDVLL
301: LMERENIKPS RATYHFLINS KGLAGDITGM EKIVETIKEE GIELDPELQS ILAKYYIRAG LKERAQDLMK EIEGKGLQQT PWVCRSLLPL YADIGDSDNV
401: RRLSRFVDQN PRYDNCISAI KAWGKLKEVE EAEAVFERLV EKYKIFPMMP YFALMEIYTE NKMLAKGRDL VKRMGNAGIA IGPSTWHALV KLYIKAGEVG
501: KAELILNRAT KDNKMRPMFT TYMAILEEYA KRGDVHNTEK VFMKMKRASY AAQLMQYETV LLAYINAKTP AYGMIERMKA DNVFPNKSLA AKLAQVNPFK
601: KCPVSVLLDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.