Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90079 | Canola | mitochondrion | 88.36 | 90.43 |
| Bra033215.1-P | Field mustard | mitochondrion | 88.17 | 90.23 |
| CDY15126 | Canola | cytosol, mitochondrion, plastid | 87.02 | 89.06 |
| VIT_15s0021g01300.t01 | Wine grape | plastid | 61.07 | 60.72 |
| PGSC0003DMT400080049 | Potato | cytosol, plastid | 59.35 | 57.06 |
| Solyc01g089870.2.1 | Tomato | nucleus | 59.16 | 56.88 |
| KRH48889 | Soybean | plastid | 57.44 | 55.13 |
| KRH66454 | Soybean | plastid | 57.63 | 54.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.07 | 50.67 |
| Zm00001d002789_P001 | Maize | plastid | 41.41 | 42.3 |
| EES12592 | Sorghum | plastid | 41.22 | 41.94 |
| TraesCS2A01G391600.1 | Wheat | plastid | 39.89 | 41.55 |
| Os04t0544400-00 | Rice | plastid | 40.46 | 41.49 |
| TraesCS2D01G389900.1 | Wheat | plastid | 40.08 | 41.1 |
| TraesCS2B01G410100.1 | Wheat | plastid | 39.5 | 40.75 |
| HORVU2Hr1G093220.7 | Barley | mitochondrion | 40.08 | 40.08 |
| AT4G01990.1 | Thale cress | mitochondrion | 29.2 | 30.48 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 28.44 | 30.35 |
| AT1G60770.1 | Thale cress | cytosol | 28.24 | 30.14 |
| AT2G20710.1 | Thale cress | mitochondrion | 27.29 | 29.18 |
| AT4G21705.1 | Thale cress | mitochondrion | 26.91 | 28.66 |
| AT1G02370.1 | Thale cress | mitochondrion | 29.2 | 28.49 |
| AT4G02820.1 | Thale cress | mitochondrion | 28.24 | 27.82 |
| AT5G09450.1 | Thale cress | mitochondrion | 20.8 | 26.65 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 24.62 | 26.11 |
| AT1G43010.1 | Thale cress | mitochondrion | 12.79 | 26.07 |
| AT1G28000.1 | Thale cress | mitochondrion | 16.41 | 22.16 |
| AT3G11380.1 | Thale cress | mitochondrion | 22.71 | 22.0 |
| AT2G20720.1 | Thale cress | cytosol | 11.26 | 19.73 |
| AT1G07590.1 | Thale cress | mitochondrion | 20.04 | 19.66 |
| AT3G11350.1 | Thale cress | mitochondrion | 12.79 | 18.66 |
| AT1G15480.1 | Thale cress | mitochondrion | 20.42 | 18.01 |
| AT1G80270.2 | Thale cress | mitochondrion | 20.23 | 17.79 |
| AT3G15590.2 | Thale cress | cytosol, mitochondrion | 19.08 | 16.39 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:839577 | UniProt:A0A178WGE7 | ProteinID:AAC24372.1 | EMBL:AC064879 |
| ProteinID:AEE27393.1 | ArrayExpress:AT1G02150 | EnsemblPlantsGene:AT1G02150 | RefSeq:AT1G02150 | TAIR:AT1G02150 | RefSeq:AT1G02150-TAIR-G |
| EnsemblPlants:AT1G02150.1 | TAIR:AT1G02150.1 | EMBL:AY094410 | Unigene:At.28171 | EMBL:BT005812 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 |
| RefSeq:NP_171717.2 | ProteinID:OAP17400.1 | PFAM:PF01535 | PFAM:PF13812 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF27 | InterPro:Pentatricopeptide_repeat | UniProt:Q8LPS6 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI00000A216B | SEG:seg | : | : | : | : |
Description
Pentatricopeptide repeat-containing protein At1g02150 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS6]
Coordinates
chr1:+:408622..410680
Molecular Weight (calculated)
59886.1 Da
IEP (calculated)
8.217
GRAVY (calculated)
-0.330
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLQAAVQNR NVPLASSASY SRLLRCRSPV VSVAALSKKT AAIVCSISQV YGYGTVDYER RPIVQWNAIY KKISLMEKPE LGAASVLNQW EKAGRKLTKW
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.