Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002789_P001 | Maize | plastid | 95.34 | 95.71 |
| Os04t0544400-00 | Rice | plastid | 83.69 | 84.34 |
| TraesCS2A01G391600.1 | Wheat | plastid | 77.86 | 79.72 |
| TraesCS2B01G410100.1 | Wheat | plastid | 78.25 | 79.33 |
| TraesCS2D01G389900.1 | Wheat | plastid | 77.86 | 78.47 |
| HORVU2Hr1G093220.7 | Barley | mitochondrion | 78.45 | 77.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.97 | 56.57 |
| VIT_15s0021g01300.t01 | Wine grape | plastid | 45.63 | 44.59 |
| Bra033215.1-P | Field mustard | mitochondrion | 41.16 | 41.41 |
| CDX90079 | Canola | mitochondrion | 41.16 | 41.41 |
| CDY15126 | Canola | cytosol, mitochondrion, plastid | 41.16 | 41.41 |
| AT1G02150.1 | Thale cress | mitochondrion | 41.94 | 41.22 |
| KRH48889 | Soybean | plastid | 42.52 | 40.11 |
| KRH66454 | Soybean | plastid | 43.11 | 40.0 |
| PGSC0003DMT400080049 | Potato | cytosol, plastid | 41.94 | 39.63 |
| Solyc01g089870.2.1 | Tomato | nucleus | 41.75 | 39.45 |
| EES02848 | Sorghum | mitochondrion | 29.32 | 28.49 |
| EER90330 | Sorghum | mitochondrion | 27.57 | 28.29 |
| EER91421 | Sorghum | mitochondrion | 26.6 | 27.62 |
| EER87766 | Sorghum | cytosol | 28.54 | 27.43 |
| OQU91552 | Sorghum | mitochondrion | 26.99 | 27.25 |
| OQU79216 | Sorghum | cytosol | 28.74 | 26.96 |
| EER90329 | Sorghum | mitochondrion | 26.21 | 26.84 |
| EES10908 | Sorghum | mitochondrion | 20.97 | 26.02 |
| EES07683 | Sorghum | mitochondrion | 25.83 | 25.24 |
| OQU86720 | Sorghum | mitochondrion | 21.55 | 18.11 |
| OQU79953 | Sorghum | cytosol | 20.58 | 16.96 |
| OQU88705 | Sorghum | plastid | 20.58 | 16.64 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:8055940 | UniProt:C5YD36 | EnsemblPlants:EES12592 | ProteinID:EES12592 |
| ProteinID:EES12592.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:IPR019734 | PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13181 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF27 | InterPro:Pentatricopeptide_repeat | SMART:SM00028 | EnsemblPlantsGene:SORBI_3006G166000 |
| SUPFAM:SSF48452 | unigene:Sbi.2330 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0001A874E1 |
| RefSeq:XP_002448264.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:52348486..52350767
Molecular Weight (calculated)
58286.4 Da
IEP (calculated)
8.223
GRAVY (calculated)
-0.454
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLHLVTSSS PLTPARPSPQ RRTCVSAAAV AVTVRCAASS SSSTPSSSSS EAAAAAGQRV AKVHSYGAVD YERRPPLRWS TLYRRIAVGH GGRPVGRTLG
101: AWDEGERRLD KWELCRIAKE LRKFRRFNLA LQVYDWMTER RDRFSLSSSD MAIQLDLIAK VRGVSHAEKY FDELPDAMKD KRTYGSLLNV YAQAMMKEKT
201: EDTFEQMRKK GFASDTLPCN VLMNFYVDSG EPNEVLAIID EMKERNVSFD VCTYNIWIKS CAAKQDAEEM ERVFSQMIAD ESVVANWTTY TTLASMYIKL
301: GNSEKAEECL KDAEKRTTGR EKKCFHYLMT LYSHLGKKEE VYRIWNWYKA TFPMIHNLGY QELLSALVRI GDIEGAELLY EEWASKSSSF DPKTMNILLA
401: WYAKEGLITK AEQTLNRFVE KGGNPKPNTW EILATAYMKD DKISEALSCM EKATAIKSAN KWKPRPTNVE SLLASFKEKN DAEGADRLVS VLTSRGCAED
501: EEYKSLINTY AFAGT
101: AWDEGERRLD KWELCRIAKE LRKFRRFNLA LQVYDWMTER RDRFSLSSSD MAIQLDLIAK VRGVSHAEKY FDELPDAMKD KRTYGSLLNV YAQAMMKEKT
201: EDTFEQMRKK GFASDTLPCN VLMNFYVDSG EPNEVLAIID EMKERNVSFD VCTYNIWIKS CAAKQDAEEM ERVFSQMIAD ESVVANWTTY TTLASMYIKL
301: GNSEKAEECL KDAEKRTTGR EKKCFHYLMT LYSHLGKKEE VYRIWNWYKA TFPMIHNLGY QELLSALVRI GDIEGAELLY EEWASKSSSF DPKTMNILLA
401: WYAKEGLITK AEQTLNRFVE KGGNPKPNTW EILATAYMKD DKISEALSCM EKATAIKSAN KWKPRPTNVE SLLASFKEKN DAEGADRLVS VLTSRGCAED
501: EEYKSLINTY AFAGT
001: MLLQAAVQNR NVPLASSASY SRLLRCRSPV VSVAALSKKT AAIVCSISQV YGYGTVDYER RPIVQWNAIY KKISLMEKPE LGAASVLNQW EKAGRKLTKW
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g02150 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.