Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019185_P001 | Maize | cytosol | 77.39 | 47.54 |
| OQU86720 | Sorghum | mitochondrion | 33.28 | 34.58 |
| Os07t0222700-01 | Rice | mitochondrion | 9.58 | 30.81 |
| EER90330 | Sorghum | mitochondrion | 18.21 | 23.11 |
| EER91421 | Sorghum | mitochondrion | 17.74 | 22.78 |
| EER90329 | Sorghum | mitochondrion | 17.11 | 21.67 |
| EER87766 | Sorghum | cytosol | 17.9 | 21.27 |
| OQU91552 | Sorghum | mitochondrion | 16.8 | 20.98 |
| EES12592 | Sorghum | plastid | 16.64 | 20.58 |
| OQU79216 | Sorghum | cytosol | 17.58 | 20.4 |
| EES10908 | Sorghum | mitochondrion | 12.87 | 19.76 |
| EES02848 | Sorghum | mitochondrion | 16.33 | 19.62 |
| EES07683 | Sorghum | mitochondrion | 15.86 | 19.17 |
| OQU79953 | Sorghum | cytosol | 17.58 | 17.92 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.5.4.19 | UniProt:A0A1W0W2X8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlants:OQU88705 | ProteinID:OQU88705 | ProteinID:OQU88705.1 | PFAM:PF13812 |
| PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF26 | InterPro:Pentatricopeptide_repeat |
| EnsemblPlantsGene:SORBI_3002G078100 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0009DC82B7 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:8132600..8136179
Molecular Weight (calculated)
71988.2 Da
IEP (calculated)
9.310
GRAVY (calculated)
-0.440
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: PPSAGNWRLE NPTRPRIASA SCGVALFLFP TPTGTLKTAS VRLLRDGRFR PSQGLLSGYS ETVAPLIQSF YSTSIEGITS IKADGEVLYQ DATTLPRDNS
101: GSGGDPRHGS RPVTKRFKNY GPNKRQGSSQ KGYRHETKLP GTGIDGFSQK GGHHGTKLPG RDGSFQKGIH HEKKLPDTGF KPFLFQTVLD ASTSALVPIL
201: DTWLKAGNRL ESDQVNMALF HLRKQRMYNK ALKFMEWIDR RKLLNFEERD YASHLDLVAR NHGIEAAEKY IERVPEAFRS EVLYETLLVN CVCRDDAQKA
301: EQVFNEIREL SLPLTVSACN QMLLLYKRVS RNKVVDILKL MENENIKPSL FTYKLMIDLK GRSNDTLGME SVLNLMKENG FEPDFGIQTM VAKFYISGDL
401: AEKAEEVTNA MEVYVNANRH AIRSLLDLYA ILGRPDDVER IWNLCTEPKL EDFLAAIKAW GKLGHIERAE ETFDALVKTS PKLTSKYFNA MLYVYAENEL
501: LDKGKKFIER MSLDGCPSSP LTWDAVVKLY VNSGELAKAD SFLANVTEDN PDRYPLFRSY VILLKAFAEK GDIHNAEKIF NRLKQTSYPA RTLPYNLLLA
601: AYANAQVTPY GFRERMKADK YSPSKSQIER LNRLDSL
101: GSGGDPRHGS RPVTKRFKNY GPNKRQGSSQ KGYRHETKLP GTGIDGFSQK GGHHGTKLPG RDGSFQKGIH HEKKLPDTGF KPFLFQTVLD ASTSALVPIL
201: DTWLKAGNRL ESDQVNMALF HLRKQRMYNK ALKFMEWIDR RKLLNFEERD YASHLDLVAR NHGIEAAEKY IERVPEAFRS EVLYETLLVN CVCRDDAQKA
301: EQVFNEIREL SLPLTVSACN QMLLLYKRVS RNKVVDILKL MENENIKPSL FTYKLMIDLK GRSNDTLGME SVLNLMKENG FEPDFGIQTM VAKFYISGDL
401: AEKAEEVTNA MEVYVNANRH AIRSLLDLYA ILGRPDDVER IWNLCTEPKL EDFLAAIKAW GKLGHIERAE ETFDALVKTS PKLTSKYFNA MLYVYAENEL
501: LDKGKKFIER MSLDGCPSSP LTWDAVVKLY VNSGELAKAD SFLANVTEDN PDRYPLFRSY VILLKAFAEK GDIHNAEKIF NRLKQTSYPA RTLPYNLLLA
601: AYANAQVTPY GFRERMKADK YSPSKSQIER LNRLDSL
001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
Arabidopsis Description
PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.