Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024521_P001 | Maize | mitochondrion | 77.92 | 94.75 |
| TraesCS7D01G293300.1 | Wheat | mitochondrion | 67.68 | 82.46 |
| TraesCS7A01G296400.1 | Wheat | mitochondrion | 66.24 | 80.7 |
| TraesCS7B01G189100.1 | Wheat | mitochondrion | 66.08 | 80.51 |
| HORVU7Hr1G066420.6 | Barley | plastid | 59.36 | 70.53 |
| GSMUA_Achr9P23230_001 | Banana | mitochondrion | 53.76 | 64.37 |
| PGSC0003DMT400069375 | Potato | cytosol | 45.92 | 60.55 |
| KRH10262 | Soybean | mitochondrion | 47.2 | 58.19 |
| KRH23068 | Soybean | mitochondrion | 46.56 | 57.4 |
| VIT_06s0004g04690.t01 | Wine grape | mitochondrion | 47.84 | 56.84 |
| Solyc06g071900.2.1 | Tomato | mitochondrion | 46.24 | 54.02 |
| AT1G07590.1 | Thale cress | mitochondrion | 45.6 | 53.37 |
| CDY09903 | Canola | mitochondrion | 44.64 | 52.64 |
| Bra031586.1-P | Field mustard | mitochondrion | 44.16 | 51.98 |
| CDY06272 | Canola | mitochondrion | 43.84 | 51.7 |
| EER87766 | Sorghum | cytosol | 18.24 | 21.27 |
| OQU91552 | Sorghum | mitochondrion | 16.96 | 20.78 |
| EES12592 | Sorghum | plastid | 16.96 | 20.58 |
| EES10908 | Sorghum | mitochondrion | 13.28 | 20.0 |
| EES07683 | Sorghum | mitochondrion | 16.8 | 19.92 |
| EER91421 | Sorghum | mitochondrion | 15.36 | 19.35 |
| OQU86720 | Sorghum | mitochondrion | 18.72 | 19.09 |
| OQU79216 | Sorghum | cytosol | 16.32 | 18.58 |
| EER90329 | Sorghum | mitochondrion | 14.88 | 18.49 |
| EES02848 | Sorghum | mitochondrion | 15.52 | 18.3 |
| EER90330 | Sorghum | mitochondrion | 14.4 | 17.93 |
| OQU88705 | Sorghum | plastid | 17.92 | 17.58 |
Protein Annotations
| EnsemblPlants:OQU79953 | EnsemblPlantsGene:SORBI_3007G051900 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0046686 | InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF588 | PFAM:PF13041 | PFscan:PS51375 | ProteinID:OQU79953 | ProteinID:OQU79953.1 |
| SEG:seg | TIGRFAMs:TIGR00756 | UniParc:UPI000B426095 | UniProt:A0A1Z5R862 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr7:+:5302596..5305654
Molecular Weight (calculated)
70125.0 Da
IEP (calculated)
10.002
GRAVY (calculated)
-0.260
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPDEDGAL RPVGATHADS NDAAPQLAAS RGAPAVELTD ATVSGATSER VRGHSSSSSS FFFEKMMGYV VVLGPWANGL LDRSKLGHDS GARRTGGLRL
101: CEAAMLLLRV LLRRRRPPLP VPTAGFFTSS GSNATAPPPP PPPPPSLGAE GPRDVPGQEG SLARRVERAA SVGAAMRGWM ADGRAVHRGH VFHAINRLRR
201: HRLHRTALQV MEWIVRERPY KLSELDYSYL LEFTAKVHGI SEAESLFLRV PQEYQKELLY NNLVMAALDL DLIKHSYAYM RKMRELSLPI SPYVYNRLII
301: LHSSPSRRKT ISKILYQMKA DRVTPHTSTY NILLKIQANE HNIDGLARVF SDMKRAKIEP NEITYGILAI SHAVARLYTV CHTYVEAIEN SMTGTNWSTL
401: EILLILYGYL GKEKELKRTW EIMQDLPHVR SKSFTVAIEA FGKVGSIDQA EKIWVQIKST KKLSLTEQFN SILSVYCRHG VVDKASSVFK EMRANGCQPN
501: AITYRHLALG CLKSGLVKEA LNTIDMGKKE VVTKKVRSST PWLETTHLLL ENFAEIGDLE NAKRLYSELN ESKYSRNSFV YNTLLKAYVK AKVYEPDLLR
601: TMILRGAMPD AETYSLLRLI EQFKI
101: CEAAMLLLRV LLRRRRPPLP VPTAGFFTSS GSNATAPPPP PPPPPSLGAE GPRDVPGQEG SLARRVERAA SVGAAMRGWM ADGRAVHRGH VFHAINRLRR
201: HRLHRTALQV MEWIVRERPY KLSELDYSYL LEFTAKVHGI SEAESLFLRV PQEYQKELLY NNLVMAALDL DLIKHSYAYM RKMRELSLPI SPYVYNRLII
301: LHSSPSRRKT ISKILYQMKA DRVTPHTSTY NILLKIQANE HNIDGLARVF SDMKRAKIEP NEITYGILAI SHAVARLYTV CHTYVEAIEN SMTGTNWSTL
401: EILLILYGYL GKEKELKRTW EIMQDLPHVR SKSFTVAIEA FGKVGSIDQA EKIWVQIKST KKLSLTEQFN SILSVYCRHG VVDKASSVFK EMRANGCQPN
501: AITYRHLALG CLKSGLVKEA LNTIDMGKKE VVTKKVRSST PWLETTHLLL ENFAEIGDLE NAKRLYSELN ESKYSRNSFV YNTLLKAYVK AKVYEPDLLR
601: TMILRGAMPD AETYSLLRLI EQFKI
001: MRSIIALMRQ REYFVQAIRR TTCVASPALN QTNFQASSFL TTLISSKKSP EETCIGSEEE EEEPNKCLSL RIEKLPKGVT VGSALQSWMG DGFPVHGGDV
101: YHAINRLRKL GRNKRALELM EWIIRERPYR LGELEYSYLL EFTVKLHGVS QGEKLFTRVP QEFQNELLYN NLVIACLDQG VIRLALEYMK KMRELGYRTS
201: HLVYNRLIIR NSAPGRRKLI AKDLALMKAD KATPHVSTYH ILMKLEANEH NIDGVLKAFD GMKKAGVEPN EVSYCILAMA HAVARLYTVA EAYTEEIEKS
301: ITGDNWSTLD ILMILYGRLG KEKELARTWN VIRGFHHVRS KSYLLATEAF ARVGNLDRAE ELWLEMKNVK GLKETEQFNS LLSVYCKDGL IEKAIGVFRE
401: MTGNGFKPNS ITYRHLALGC AKAKLMKEAL KNIEMGLNLK TSKSIGSSTP WLETTLSIIE CFAEKGDVEN SEKLFEEVKN AKYNRYAFVY NALFKAYVKA
501: KVYDPNLFKR MVLGGARPDA ESYSLLKLVE QYKP
101: YHAINRLRKL GRNKRALELM EWIIRERPYR LGELEYSYLL EFTVKLHGVS QGEKLFTRVP QEFQNELLYN NLVIACLDQG VIRLALEYMK KMRELGYRTS
201: HLVYNRLIIR NSAPGRRKLI AKDLALMKAD KATPHVSTYH ILMKLEANEH NIDGVLKAFD GMKKAGVEPN EVSYCILAMA HAVARLYTVA EAYTEEIEKS
301: ITGDNWSTLD ILMILYGRLG KEKELARTWN VIRGFHHVRS KSYLLATEAF ARVGNLDRAE ELWLEMKNVK GLKETEQFNS LLSVYCKDGL IEKAIGVFRE
401: MTGNGFKPNS ITYRHLALGC AKAKLMKEAL KNIEMGLNLK TSKSIGSSTP WLETTLSIIE CFAEKGDVEN SEKLFEEVKN AKYNRYAFVY NALFKAYVKA
501: KVYDPNLFKR MVLGGARPDA ESYSLLKLVE QYKP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940Q2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.