Factsheet for TraesCS7D01G293300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G296400.1	Wheat	mitochondrion	96.69	96.69
TraesCS7B01G189100.1	Wheat	mitochondrion	96.1	96.1
Zm00001d024521_P001	Maize	mitochondrion	81.87	81.71
HORVU7Hr1G066420.6	Barley	plastid	82.07	80.04
OQU79953	Sorghum	cytosol	82.46	67.68
GSMUA_Achr9P23230_001	Banana	mitochondrion	63.74	62.64
PGSC0003DMT400069375	Potato	cytosol	55.75	60.34
KRH10262	Soybean	mitochondrion	56.14	56.8
KRH23068	Soybean	mitochondrion	54.97	55.62
VIT_06s0004g04690.t01	Wine grape	mitochondrion	54.97	53.61
Solyc06g071900.2.1	Tomato	mitochondrion	55.75	53.46
AT1G07590.1	Thale cress	mitochondrion	54.0	51.87
CDY09903	Canola	mitochondrion	53.41	51.7
Bra031586.1-P	Field mustard	mitochondrion	53.22	51.41
CDY06272	Canola	mitochondrion	53.02	51.32
TraesCS1D01G166700.1	Wheat	mitochondrion	20.86	21.62
TraesCS3D01G195000.1	Wheat	mitochondrion	25.54	21.37
TraesCS6D01G341400.1	Wheat	mitochondrion	21.64	21.35
TraesCS2D01G389900.1	Wheat	plastid	19.3	19.37
TraesCS7D01G056000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	20.27	19.37
TraesCS5D01G112000.1	Wheat	mitochondrion	18.71	18.82
TraesCS1D01G166800.1	Wheat	mitochondrion	18.52	18.59
TraesCS6D01G079300.1	Wheat	mitochondrion	18.32	18.47
TraesCS2D01G315700.1	Wheat	mitochondrion	15.79	18.37
TraesCS6D01G079200.1	Wheat	plastid	19.3	18.3
TraesCS6D01G079100.1	Wheat	mitochondrion	16.37	17.54
TraesCS2D01G553300.1	Wheat	mitochondrion	19.1	17.5
TraesCS6D01G079400.1	Wheat	plastid	14.23	16.19
TraesCS2D01G553100.1	Wheat	mitochondrion	16.37	15.41

Protein Annotations

EnsemblPlants:TraesCS7D01G293300.1	EnsemblPlantsGene:TraesCS7D01G293300	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0046686	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf
PANTHER:PTHR24015	PANTHER:PTHR24015:SF588	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375
SEG:seg	TIGRFAMs:TIGR00756	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:-:363044786..363046500

Molecular Weight (calculated)

58552.6 Da

IEP (calculated)

10.005

GRAVY (calculated)

-0.209

Length

513 amino acids

Sequence
(BLAST)

001: MLTPLRVLLR CRRPPIRAAA TFFTSSGSAP LAPPPAPVET ADESEQEGSL AQRVERAASA CAAIRGWMAA GRAVHRGHIF HAINRLRRRR LHRTGLQVME
101: WVIRERPYKL SELDYSYLLE FTAKVHGISE AESLFLRIPQ EFRNELLYNN LVMACLEQGL IKLSYGYMRK MRELSLPISP YVYNRLIILH SSEGRRKTIS
201: KILAQMKASR VTPHTSTYNI LLKIQANEHN IDGVARVFSD MKRAKIEPNE ITYGILAISH AVARLYTVSQ TYIEAIKNSM TGTNWSTQEI LLILYGYLGK
301: EHELKMTWKL MQCLPHIRSK SFTLAIEAFG KVSCVEQAEE IWREIKSTRK LKLTEQFNSM LSVYCRHGLV DKAAAVFKEM RASGCQPNAI TYRHLALGCL
401: KAGLVKQAVN TMDMGKKEVV TRKVKSSTPW LETTHLLLEN FAEIGDLENA KKVFAELNES KYCRNSFVYN TLLKAYVKAK VYEPDFVKTM ILRDAMPDAE
501: THSLLRLIEQ YKT

Best Arabidopsis Sequence Match ( AT1G07590.1 )
(BLAST)

001: MRSIIALMRQ REYFVQAIRR TTCVASPALN QTNFQASSFL TTLISSKKSP EETCIGSEEE EEEPNKCLSL RIEKLPKGVT VGSALQSWMG DGFPVHGGDV
101: YHAINRLRKL GRNKRALELM EWIIRERPYR LGELEYSYLL EFTVKLHGVS QGEKLFTRVP QEFQNELLYN NLVIACLDQG VIRLALEYMK KMRELGYRTS
201: HLVYNRLIIR NSAPGRRKLI AKDLALMKAD KATPHVSTYH ILMKLEANEH NIDGVLKAFD GMKKAGVEPN EVSYCILAMA HAVARLYTVA EAYTEEIEKS
301: ITGDNWSTLD ILMILYGRLG KEKELARTWN VIRGFHHVRS KSYLLATEAF ARVGNLDRAE ELWLEMKNVK GLKETEQFNS LLSVYCKDGL IEKAIGVFRE
401: MTGNGFKPNS ITYRHLALGC AKAKLMKEAL KNIEMGLNLK TSKSIGSSTP WLETTLSIIE CFAEKGDVEN SEKLFEEVKN AKYNRYAFVY NALFKAYVKA
501: KVYDPNLFKR MVLGGARPDA ESYSLLKLVE QYKP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940Q2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.