Factsheet for HORVU7Hr1G066420.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G189100.1	Wheat	mitochondrion	80.23	82.26
TraesCS7D01G293300.1	Wheat	mitochondrion	80.04	82.07
TraesCS7A01G296400.1	Wheat	mitochondrion	79.85	81.87
Zm00001d024521_P001	Maize	mitochondrion	69.39	71.01
OQU79953	Sorghum	cytosol	70.53	59.36
PGSC0003DMT400069375	Potato	cytosol	51.71	57.38
GSMUA_Achr9P23230_001	Banana	mitochondrion	56.27	56.7
KRH23068	Soybean	mitochondrion	50.57	52.47
KRH10262	Soybean	mitochondrion	50.57	52.47
Solyc06g071900.2.1	Tomato	mitochondrion	52.28	51.4
VIT_06s0004g04690.t01	Wine grape	mitochondrion	49.62	49.62
CDY09903	Canola	mitochondrion	48.29	47.92
Bra031586.1-P	Field mustard	mitochondrion	48.29	47.83
AT1G07590.1	Thale cress	mitochondrion	48.48	47.75
CDY06272	Canola	mitochondrion	47.91	47.55
HORVU3Hr1G040710.1	Barley	mitochondrion	21.86	18.79
HORVU6Hr1G085430.2	Barley	mitochondrion	18.63	18.53
HORVU2Hr1G093220.7	Barley	mitochondrion	18.06	18.13
HORVU5Hr1G027150.1	Barley	mitochondrion	17.68	18.09
HORVU7Hr1G011310.1	Barley	cytosol, mitochondrion, nucleus	18.06	17.24
HORVU3Hr1G070650.1	Barley	cytosol	4.75	17.24
HORVU1Hr1G045170.4	Barley	cytosol, mitochondrion, nucleus, plastid	16.92	17.15
HORVU6Hr1G016360.7	Barley	mitochondrion	15.59	16.4
HORVU2Hr1G079080.2	Barley	cytosol	8.56	16.36
HORVU1Hr1G085940.2	Barley	cytosol	5.13	15.88
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	15.02	15.77
HORVU6Hr1G016390.10	Barley	plastid	16.35	15.47

Protein Annotations

EnsemblPlants:HORVU7Hr1G066420.6	EnsemblPlantsGene:HORVU7Hr1G066420	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0046686	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf
PANTHER:PTHR24015	PANTHER:PTHR24015:SF588	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375
SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI000B47E36C	UniProt:A0A287WR09	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:-:338763880..338766492

Molecular Weight (calculated)

59875.8 Da

IEP (calculated)

9.982

GRAVY (calculated)

-0.262

Length

526 amino acids

Sequence
(BLAST)

001: RVSVLDSLPT FLLTSIKRRV ESLRPSSRSP SHHGRATPSA KHGWFRTSDR TWKRQASPSP RRSRPLRNLH LCSEALSSAD AVPAGRCSRD CWVAAAEWGK
101: GRRARQVFDE VMEWVIRERP YKLSELDYSY LLEFTAKVHG ISEAESLFLR IPQEYRNELL YNNLVMACLE LGLIKLSYGY MRKMRELSLT ISPYVFNRLI
201: ILHSSEGRRK TISKILAQMK ASRVTPHTST YNILLKIQAN EHSIDGVARV FSDMKRAKIE PNEITYGILA ISHAVARLYT VSQTYIEAIK NSMTGTNWST
301: QEILLILYGY LGKENELKMT WNLMQCLPHI RSKSFTLAIE AFGKVGCVGQ AEEIWGEIKS TRKLRLTEQF NSMLSVYCRH GLVDKAAAVF KEMRASGCQP
401: NAITYRHLAL GCLKAGLVKQ AVNTMNMGRE EVVTRKVKSS TPWLETTHLL LENFAEIGDL ENAKKVFAEL NESKYCRNSF VYNTILKAYV KAKVCEPDFV
501: KTMILGGAMP DAETHSLLRL IEQYKT

Best Arabidopsis Sequence Match ( AT1G07590.1 )
(BLAST)

001: MRSIIALMRQ REYFVQAIRR TTCVASPALN QTNFQASSFL TTLISSKKSP EETCIGSEEE EEEPNKCLSL RIEKLPKGVT VGSALQSWMG DGFPVHGGDV
101: YHAINRLRKL GRNKRALELM EWIIRERPYR LGELEYSYLL EFTVKLHGVS QGEKLFTRVP QEFQNELLYN NLVIACLDQG VIRLALEYMK KMRELGYRTS
201: HLVYNRLIIR NSAPGRRKLI AKDLALMKAD KATPHVSTYH ILMKLEANEH NIDGVLKAFD GMKKAGVEPN EVSYCILAMA HAVARLYTVA EAYTEEIEKS
301: ITGDNWSTLD ILMILYGRLG KEKELARTWN VIRGFHHVRS KSYLLATEAF ARVGNLDRAE ELWLEMKNVK GLKETEQFNS LLSVYCKDGL IEKAIGVFRE
401: MTGNGFKPNS ITYRHLALGC AKAKLMKEAL KNIEMGLNLK TSKSIGSSTP WLETTLSIIE CFAEKGDVEN SEKLFEEVKN AKYNRYAFVY NALFKAYVKA
501: KVYDPNLFKR MVLGGARPDA ESYSLLKLVE QYKP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940Q2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.