Factsheet for HORVU5Hr1G027150.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G099700.1	Wheat	mitochondrion	96.11	96.86
TraesCS5B01G104900.1	Wheat	mitochondrion	95.14	95.88
TraesCS5D01G112000.1	Wheat	mitochondrion	94.75	95.49
Os12t0527900-01	Rice	mitochondrion	84.82	84.82
Zm00001d023915_P001	Maize	mitochondrion	80.35	82.44
OQU79216	Sorghum	cytosol	81.91	76.68
GSMUA_Achr1P17120_001	Banana	mitochondrion	59.92	59.23
VIT_16s0039g02800.t01	Wine grape	cytosol	50.39	52.01
Solyc06g005140.2.1	Tomato	mitochondrion	49.22	48.65
PGSC0003DMT400092266	Potato	mitochondrion	17.51	48.65
PGSC0003DMT400077284	Potato	mitochondrion	49.42	48.47
PGSC0003DMT400012266	Potato	cytosol, mitochondrion, plastid	48.25	47.33
CDX91277	Canola	mitochondrion	47.67	47.21
Bra018528.1-P	Field mustard	mitochondrion	47.08	47.08
CDX97288	Canola	mitochondrion	46.89	46.89
AT4G02820.1	Thale cress	mitochondrion	48.25	46.62
PGSC0003DMT400031020	Potato	cytosol	10.31	44.54
PGSC0003DMT400031016	Potato	cytosol	24.32	41.12
HORVU6Hr1G085430.2	Barley	mitochondrion	31.91	31.0
HORVU3Hr1G070650.1	Barley	cytosol	8.56	30.34
HORVU2Hr1G093220.7	Barley	mitochondrion	29.57	29.01
HORVU1Hr1G085940.2	Barley	cytosol	9.34	28.24
HORVU2Hr1G079080.2	Barley	cytosol	14.2	26.55
HORVU1Hr1G045170.4	Barley	cytosol, mitochondrion, nucleus, plastid	26.46	26.2
HORVU7Hr1G011310.1	Barley	cytosol, mitochondrion, nucleus	27.43	25.59
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	24.51	25.15
HORVU6Hr1G016360.7	Barley	mitochondrion	23.35	24.0
HORVU6Hr1G016390.10	Barley	plastid	25.29	23.38
HORVU3Hr1G040710.1	Barley	mitochondrion	25.1	21.08
CDY36566	Canola	mitochondrion	21.79	18.64
HORVU7Hr1G066420.6	Barley	plastid	18.09	17.68
CDY36565	Canola	cytosol	1.36	2.09

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A287QR04	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	EnsemblPlantsGene:HORVU5Hr1G027150
EnsemblPlants:HORVU5Hr1G027150.1	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375
PANTHER:PTHR24015	PANTHER:PTHR24015:SF935	InterPro:Pentatricopeptide_repeat	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B4686B5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:154554507..154557158

Molecular Weight (calculated)

58361.7 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.295

Length

514 amino acids

Sequence
(BLAST)

001: YCEAMLSRRL AAATGYARLL SASAPAASTG GAGGSISVGG GDTLGKRLLK LIYPKRSAVV VLRRWAEEGR AVHKYQLNRV VRELRKYRRF KHALEICEWM
101: RTQPEIRLLP GDHAVHLDLV AKVRGLASAE KFFEDVPERA KGPSTCNSLL HAYVQHGARD KAEAMLKEMA DAGYLTCALP FNHMMSLYMS VGELEKVPEM
201: IKELRRYTIP DLVTYNIWLT YCSRKNSVKS AEKVFDLMKD DRVVPDWMTF SLLASIYINA GLHVKGRDAL VEMEKRASRK ERAAYSSLLT MYASLSDRGN
301: LDRVWSKMRQ TFRKFSDAEY KCMLTSLTRF GDIAAAEFVY GEWESQSGTK DSRIPNTILS FYIKNGEMEK AESFLQYIVQ KGVKPSYSTW ELFVWGYLGN
401: DERTDKVMEC LKKALSSLEK WEPNPQLVAA LFSQIEKKGD IEAAEELLVV LRGAGYVTTE IYNLVLRTYA KAEMMPLIID ERMDQDKVSM DDETRRLLKS
501: TSKYPIGEVS TLMS

Best Arabidopsis Sequence Match ( AT4G02820.1 )
(BLAST)

001: MNKNMLVRSA RPTLASIHRL FSAAAAATVD TATAPVVKPR SGGGKGGESA NKKETVVGGR DTLGGRLLSL VYTKRSAVVT IRKWKEEGHS VRKYELNRIV
101: RELRKIKRYK HALEICEWMV VQEDIKLQAG DYAVHLDLIS KIRGLNSAEK FFEDMPDQMR GHAACTSLLH SYVQNKLSDK AEALFEKMGE CGFLKSCLPY
201: NHMLSMYISR GQFEKVPVLI KELKIRTSPD IVTYNLWLTA FASGNDVEGA EKVYLKAKEE KLNPDWVTYS VLTNLYAKTD NVEKARLALK EMEKLVSKKN
301: RVAYASLISL HANLGDKDGV NLTWKKVKSS FKKMNDAEYL SMISAVVKLG EFEQAKGLYD EWESVSGTGD ARIPNLILAE YMNRDEVLLG EKFYERIVEK
401: GINPSYSTWE ILTWAYLKRK DMEKVLDCFG KAIDSVKKWT VNVRLVKGAC KELEEQGNVK GAEKLMTLLQ KAGYVNTQLY NSLLRTYAKA GEMALIVEER
501: MAKDNVELDE ETKELIRLTS QMRVTEISST IS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g02820, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SY07]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.