CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35213	Canola	cytosol	0.6	4.88
CDY39654	Canola	mitochondrion	4.18	2.33
CDY36566	Canola	mitochondrion	4.18	2.33
CDY57695	Canola	mitochondrion	3.28	1.82
CDY24553	Canola	mitochondrion	1.49	1.74
PGSC0003DMT400031020	Potato	cytosol	0.6	1.68
PGSC0003DMT400092266	Potato	mitochondrion	0.9	1.62
CDY65573	Canola	mitochondrion	1.79	1.62
CDY15126	Canola	cytosol, mitochondrion, plastid	2.39	1.56
CDX79395	Canola	cytosol	4.78	1.56
CDY46999	Canola	mitochondrion	2.09	1.43
CDX96239	Canola	mitochondrion	2.09	1.43
CDY35212	Canola	mitochondrion	1.19	1.42
CDY34141	Canola	mitochondrion	2.09	1.42
TraesCS5A01G099700.1	Wheat	mitochondrion	2.09	1.37
TraesCS5D01G112000.1	Wheat	mitochondrion	2.09	1.37
TraesCS5B01G104900.1	Wheat	mitochondrion	2.09	1.37
CDX90079	Canola	mitochondrion	2.09	1.37
HORVU5Hr1G027150.1	Barley	mitochondrion	2.09	1.36
CDX91277	Canola	mitochondrion	2.09	1.35
CDY05574	Canola	mitochondrion	2.09	1.34
PGSC0003DMT400031016	Potato	cytosol	1.19	1.32
CDY30088	Canola	plastid	2.39	1.3
CDX97686	Canola	plastid	2.39	1.29
CDX94049	Canola	cytosol	2.69	1.28
CDY19721	Canola	mitochondrion	1.79	1.26
CDX99984	Canola	mitochondrion	1.79	1.26
CDY39781	Canola	mitochondrion	1.79	1.26
CDY25035	Canola	mitochondrion, plastid	1.79	1.22
Os12t0527900-01	Rice	mitochondrion	1.79	1.17
CDX97288	Canola	mitochondrion	1.79	1.17
CDY00734	Canola	mitochondrion	0.6	1.13
CDY03299	Canola	mitochondrion	1.49	1.06
CDY05786	Canola	plastid	1.49	1.03
CDY31943	Canola	plastid	1.49	1.03
CDY71968	Canola	plastid	0.9	1.03
CDX98698	Canola	mitochondrion	1.49	1.02
Zm00001d023915_P001	Maize	mitochondrion	1.49	1.0
CDY48421	Canola	mitochondrion	1.19	0.97
GSMUA_Achr1P17120_001	Banana	mitochondrion	1.49	0.96
Solyc06g005140.2.1	Tomato	mitochondrion	1.49	0.96
PGSC0003DMT400012266	Potato	cytosol, mitochondrion, plastid	1.49	0.95
PGSC0003DMT400077284	Potato	mitochondrion	1.49	0.95
OQU79216	Sorghum	cytosol	1.49	0.91
CDY50358	Canola	cytosol	0.6	0.85
VIT_16s0039g02800.t01	Wine grape	cytosol	1.19	0.8
CDY66759	Canola	cytosol	1.79	0.8
CDX91822	Canola	mitochondrion	1.19	0.8
CDX90962	Canola	mitochondrion	1.19	0.8
CDY15237	Canola	mitochondrion	1.19	0.78
CDX89976	Canola	mitochondrion	1.19	0.78
CDY06272	Canola	mitochondrion	1.19	0.75
CDY09903	Canola	mitochondrion	1.19	0.75
CDY44801	Canola	mitochondrion	0.9	0.74
CDY27647	Canola	mitochondrion	0.9	0.74
CDY50357	Canola	mitochondrion	0.3	0.5
CDY53324	Canola	mitochondrion, plastid	0.9	0.41
CDY27645	Canola	mitochondrion	0.3	0.39
CDY53325	Canola	mitochondrion	0.6	0.29
CDX73880	Canola	mitochondrion	0.3	0.2
CDY24554	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A078HDZ1	EnsemblPlants:CDY36565	ProteinID:CDY36565	ProteinID:CDY36565.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00062253001	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EDAF40	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:

Description

BnaA06g10180DBnaA06g10180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDZ1]

Coordinates

chrLK032378:+:180806..182864

Molecular Weight (calculated)

36755.8 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.435

Length

335 amino acids

Sequence
(BLAST)

001: MGVPLVCHGH SRPVVDVSYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKHAMR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH LLLTGGMEKI LRIFDMNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVQTLE TKFPVTSAEV SQDGRYITTA
201: DGSSVKFWDA NNFGLLKSYE MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYSPGGESY TSGSEDGTVR IWEVVGSVNH
301: EEKESDQSGN VKLVAEEVVR KAESLRISEK AAEAK

Best Arabidopsis Sequence Match ( AT1G15470.1 )
(BLAST)

001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK

Arabidopsis Description

F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.