CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G80270.2	Thale cress	mitochondrion	82.75	83.72
Bra003559.1-P	Field mustard	cytosol	96.02	81.32
CDY36566	Canola	mitochondrion	64.51	64.73
CDY39654	Canola	mitochondrion	64.18	64.39
KRH66764	Soybean	cytosol	39.47	57.35
CDX79395	Canola	cytosol	95.52	56.2
KRH69049	Soybean	mitochondrion	54.23	53.69
VIT_08s0007g05090.t01	Wine grape	mitochondrion	55.56	53.69
GSMUA_Achr5P27560_001	Banana	cytosol	44.44	52.24
KRH31614	Soybean	mitochondrion	51.41	51.67
GSMUA_Achr8P21680_001	Banana	mitochondrion	52.74	51.46
PGSC0003DMT400022632	Potato	mitochondrion	53.23	51.44
Solyc12g020050.1.1	Tomato	plastid	52.9	51.12
KRG95098	Soybean	mitochondrion	51.24	50.66
TraesCS3D01G195000.1	Wheat	mitochondrion	47.26	46.49
TraesCS3B01G220600.2	Wheat	mitochondrion	47.1	46.33
HORVU3Hr1G040710.1	Barley	mitochondrion	46.93	46.24
TraesCS3A01G191200.1	Wheat	mitochondrion	46.6	45.91
PGSC0003DMT400021596	Potato	mitochondrion	46.6	45.84
OQU86720	Sorghum	mitochondrion	46.27	45.51
Zm00001d008224_P002	Maize	mitochondrion	46.77	45.34
GSMUA_Achr11P...	Banana	mitochondrion	46.6	44.75
Os12t0170100-01	Rice	mitochondrion	44.94	44.35
Zm00001d040475_P001	Maize	mitochondrion	44.94	44.21
Os01t0280400-00	Rice	mitochondrion	44.44	43.86
CDX97686	Canola	plastid	42.29	41.13
CDY30088	Canola	plastid	41.79	40.84
CDY24553	Canola	mitochondrion	13.43	28.12
CDY39781	Canola	mitochondrion	19.73	24.9
CDY03299	Canola	mitochondrion	19.24	24.52
CDY50357	Canola	mitochondrion	8.13	24.5
CDX96239	Canola	mitochondrion	19.9	24.44
CDY34141	Canola	mitochondrion	19.9	24.39
CDX99984	Canola	mitochondrion	19.24	24.27
CDY46999	Canola	mitochondrion	19.73	24.24
CDY35212	Canola	mitochondrion	11.28	24.2
CDX98698	Canola	mitochondrion	19.57	24.18
CDX91277	Canola	mitochondrion	20.73	24.08
CDX91822	Canola	mitochondrion	19.9	24.0
CDX97288	Canola	mitochondrion	20.23	23.74
CDX90962	Canola	mitochondrion	19.57	23.55
CDY25035	Canola	mitochondrion, plastid	19.07	23.47
CDY19721	Canola	mitochondrion	18.41	23.27
CDY00734	Canola	mitochondrion	6.8	23.16
CDY65573	Canola	mitochondrion	14.1	22.97
CDY09903	Canola	mitochondrion	19.9	22.64
CDY06272	Canola	mitochondrion	19.73	22.45
CDX89976	Canola	mitochondrion	18.91	22.14
CDY15237	Canola	mitochondrion	18.74	22.03
CDY27645	Canola	mitochondrion	9.45	22.01
CDY05574	Canola	mitochondrion	19.07	21.95
CDY44801	Canola	mitochondrion	14.59	21.78
CDY24554	Canola	cytosol	5.14	20.26
CDX90079	Canola	mitochondrion	17.08	20.12
CDY50358	Canola	cytosol	7.79	20.0
CDY71968	Canola	plastid	9.62	19.86
CDY15126	Canola	cytosol, mitochondrion, plastid	16.75	19.73
CDY05786	Canola	plastid	15.09	18.76
CDY31943	Canola	plastid	14.93	18.56
CDY27647	Canola	mitochondrion	11.61	17.2
CDX94049	Canola	cytosol	19.24	16.52
CDY48421	Canola	mitochondrion	10.95	15.98
CDY53325	Canola	mitochondrion	15.09	13.04
CDY53324	Canola	mitochondrion, plastid	14.93	12.31
CDY35213	Canola	cytosol	0.83	12.2
CDX73880	Canola	mitochondrion	9.78	11.78
CDY66759	Canola	cytosol	13.43	10.84
CDY36565	Canola	cytosol	1.82	3.28

Protein Annotations

EnsemblPlants:CDY57695	EnsemblPlantsGene:GSBRNA2T00022543001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF26	PFAM:PF01535	PFAM:PF13812	PFscan:PS51375	ProteinID:CDY57695	ProteinID:CDY57695.1
SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI0004EDF49F	UniProt:A0A078J4L8	MapMan:16.12.5.4.19	:

Description

BnaA07g38350DBnaA07g38350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4L8]

Coordinates

chrLK033596:+:42238..44813

Molecular Weight (calculated)

68595.1 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.542

Length

603 amino acids

Sequence
(BLAST)

001: MFALSKVLRR SQRLRLGACT TALYSNEIQS GERSFFTLQS NSILHEQQLE PLPRVHNMSS SMSNRLLSST AGTKSDQEED DDLEDGFSEL ENSNSDDSDV
101: DEGKLSAADD EDEEEELELD LAETDDSKKT LEKKQSELFK AIVSAGGLSV GSALDKWVEE EGNEITRTEV AKAMLQLRRR RMYGRALQMS EWLEANKKIE
201: MNERDYASRL DLIVKTRGLE KGEAYVDKIP KSFRGEVMYR TLLANCVVAC NVKKSELVFN RMKDLGFPRS GFTCDQMLLL YKRVDRKKIA DVLLLMEKEN
301: VKPSLLTYKI LIDVKGSSND IKGMEQVVET MKDEGVEPDF NTQAIIARHY SVAGLKEKAE SVLKEMEGES LEANRRAFKD LLSIYASLGR EDEVRRVWKI
401: CEPKPRFEES LSAIQAFGKL NKVQEAEEVF EKVIKMDRRV SSNTFSVLLR VYVDHKMLSK GKDLVKRMAE SGCRIEASTW DALIRLYVEA GEVEKADSLL
501: SKASKQSHTK LMMSSFMYIM DEYAKRGDVH NTEKIFQKMR EVGYTSRLRQ FQALMQGYLN AKAPAYGMRD RMKADNIFPN KAMAAQLAQG DPFKKTAISD
601: ILD

Best Arabidopsis Sequence Match ( AT1G80270.4 )
(BLAST)

001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD

Arabidopsis Description

PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.