CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71968	Canola	plastid	52.1	89.38
CDY53324	Canola	mitochondrion, plastid	98.6	67.58
Bra001400.1-P	Field mustard	mitochondrion, plastid	97.8	65.42
AT3G11350.1	Thale cress	mitochondrion	37.72	52.65
CDY00734	Canola	mitochondrion	15.37	43.5
CDY53325	Canola	mitochondrion	53.69	38.54
CDY35212	Canola	mitochondrion	19.76	35.23
CDY35213	Canola	cytosol	2.79	34.15
CDY27645	Canola	mitochondrion	17.37	33.59
CDY65573	Canola	mitochondrion	22.16	30.0
CDY48421	Canola	mitochondrion	20.16	24.46
CDY27647	Canola	mitochondrion	19.56	24.08
CDY66759	Canola	cytosol	30.34	20.35
CDY39781	Canola	mitochondrion	19.36	20.29
CDY50357	Canola	mitochondrion	7.98	20.0
CDY03299	Canola	mitochondrion	18.76	19.87
CDX98698	Canola	mitochondrion	17.37	17.83
VIT_12s0028g03870.t01	Wine grape	cytosol, mitochondrion	16.77	16.83
CDY24553	Canola	mitochondrion	9.58	16.67
CDY44801	Canola	mitochondrion	13.37	16.58
KRH22399	Soybean	cytosol	15.37	16.18
CDY05786	Canola	plastid	15.57	16.08
Os10t0501300-01	Rice	mitochondrion	16.37	15.98
KRH26940	Soybean	cytosol	15.77	15.93
PGSC0003DMT400047255	Potato	cytosol, mitochondrion, plastid	15.77	15.86
Solyc07g054090.2.1	Tomato	cytosol, mitochondrion, plastid	15.57	15.82
Os10t0501000-01	Rice	cytosol	14.17	15.74
CDY31943	Canola	plastid	15.17	15.67
GSMUA_Achr5P20750_001	Banana	mitochondrion	16.97	15.57
CDY15126	Canola	cytosol, mitochondrion, plastid	15.77	15.43
CDX97288	Canola	mitochondrion	15.77	15.37
CDX90079	Canola	mitochondrion	15.57	15.23
CDX91277	Canola	mitochondrion	15.57	15.03
OQU91552	Sorghum	mitochondrion	14.97	14.71
Zm00001d032543_P001	Maize	mitochondrion	15.17	14.7
TraesCS1B01G188200.1	Wheat	mitochondrion	14.37	14.63
PGSC0003DMT400047256	Potato	extracellular	9.18	14.24
TraesCS1D01G166700.1	Wheat	mitochondrion	13.97	14.14
CDY25035	Canola	mitochondrion, plastid	13.37	13.67
Solyc07g054100.1.1	Tomato	cytosol	8.78	13.62
CDX90962	Canola	mitochondrion	13.37	13.37
CDY46999	Canola	mitochondrion	12.97	13.24
CDY34141	Canola	mitochondrion	12.97	13.21
CDY19721	Canola	mitochondrion	12.57	13.21
CDX91822	Canola	mitochondrion	13.17	13.2
CDX94049	Canola	cytosol	18.36	13.11
CDX96239	Canola	mitochondrion	12.77	13.03
CDX89976	Canola	mitochondrion	13.37	13.01
CDY15237	Canola	mitochondrion	13.17	12.87
CDX99984	Canola	mitochondrion	12.18	12.76
TraesCS1A01G168700.1	Wheat	mitochondrion	14.77	12.67
CDY05574	Canola	mitochondrion	12.97	12.4
Os10t0501200-00	Rice	mitochondrion	15.37	12.3
CDY09903	Canola	mitochondrion	10.78	10.19
CDY06272	Canola	mitochondrion	10.58	10.0
CDY39654	Canola	mitochondrion	11.78	9.82
CDY57695	Canola	mitochondrion	11.78	9.78
CDY36566	Canola	mitochondrion	11.58	9.65
CDX97686	Canola	plastid	11.38	9.19
CDY30088	Canola	plastid	10.78	8.75
CDY24554	Canola	cytosol	2.59	8.5
CDY50358	Canola	cytosol	3.39	7.23
CDX79395	Canola	cytosol	12.18	5.95
CDY36565	Canola	cytosol	0.2	0.3

Protein Annotations

EnsemblPlants:CDX73880	EnsemblPlantsGene:GSBRNA2T00111597001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF644
PFAM:PF13812	ProteinID:CDX73880	ProteinID:CDX73880.1	SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI0004EE0CE4
MapMan:35.1	:	:	:	:	:

Description

BnaA03g31670D

Coordinates

chrLK031800:-:374208..376457

Molecular Weight (calculated)

57617.0 Da

IEP (calculated)

8.237

GRAVY (calculated)

-0.304

Length

501 amino acids

Sequence
(BLAST)

001: MMSHNLQHHT RSILAHSSRT LLFCSYTNGT LPSSPRHSTT TLHSRIEAAS EGKTAITRLR DSQRFRQALE VSDWMIEHKL CNLIPEDFTA RFCLMENVLG
101: LKEAEKFFES VPENQRGEAI YTALLNCYTV KKDLIGLLLK PLPYNSMMSL YFSVRKRDKV DEIMREMKEN NVQFDTLTVN IALRVYASVS DLLAMEKLLA
201: HWEGTITLHC LTSLDMAKAY LRNEIYYNEW DGSGLDLDVR IPTMLASGYR EKGLVKKADK LMIKTIRNEK MVRPIGHKVM KLLEKMKEKN IEPDNVIMNH
301: VLRVNAYVSA MECMEKYKRE WEDNNLKLEV RTMDAIAKAY EGEGSTLKAI EITSSKKEVY RLWDAYKKDN VGDMSNEGYR SVIRSLLKLD DVKGAQEVFN
401: EWEPERYEFD SRIPSLLISR YCEEEKYNEV KTRDVMKLSR KKRRGLQFEL FKDVCVLLTA TSFGVGFVPC MVSLCGGETI TVWGSLGVVV TGIVLAVTNS
501: F

Best Arabidopsis Sequence Match ( AT3G11350.1 )
(BLAST)

001: MSMTLSLQRH AKRILAYSNR PRFFCSYRNG TLSTNQTLHG RIEAALDQKA EITARLHQAL EVSDWMIEHK ICCLVPEDFS ARFQLIENVL GLEEAEKYFE
101: SIPENLRGES LYTALLRSYA KRSEKKYLDR ASRIHIQEDE RISSFGTRDK VDESLREMKE SNIDLDRLTV NKALRVYAAA SDVAAMERFL ADWEGTVKLD
201: LMISTEQRRY TNEWQCSRLE FDVRMPIMLV SAYREKGMVE KAEKLMTRWG LKYRLCSKAC IGDKAMKLVL EMKENKIEPD SVTINNVLRV NAYGLALESM
301: EKFKSKWDGD GKTKLDAMAA AYERAGLLLK AIEIQRSKKE VYRLWNEYKN KANDGIARE

Arabidopsis Description

Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAY8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.