Factsheet for Os10t0501200-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0501000-01	Rice	cytosol	64.22	89.14
Os10t0501300-01	Rice	mitochondrion	66.77	81.48
TraesCS1B01G188200.1	Wheat	mitochondrion	48.72	61.99
TraesCS1D01G166700.1	Wheat	mitochondrion	48.4	61.21
OQU91552	Sorghum	mitochondrion	46.65	57.25
Zm00001d032543_P001	Maize	mitochondrion	46.65	56.48
TraesCS1A01G168700.1	Wheat	mitochondrion	50.0	53.6
GSMUA_Achr5P20750_001	Banana	mitochondrion	33.39	38.28
PGSC0003DMT400058755	Potato	cytosol	21.57	34.18
AT2G20710.1	Thale cress	mitochondrion	26.68	34.08
VIT_12s0028g03880.t01	Wine grape	cytosol, mitochondrion	27.0	33.73
CDY39781	Canola	mitochondrion	25.24	33.05
Bra036673.1-P	Field mustard	mitochondrion	25.24	33.05
Solyc02g078330.2.1	Tomato	cytosol, mitochondrion	23.8	32.82
PGSC0003DMT400047256	Potato	extracellular	16.93	32.82
KRH22399	Soybean	cytosol	24.92	32.77
CDY03299	Canola	mitochondrion	24.76	32.77
KRH26940	Soybean	cytosol	25.88	32.66
PGSC0003DMT400076352	Potato	cytosol, mitochondrion	24.92	32.64
Solyc07g054100.1.1	Tomato	cytosol	16.61	32.2
Solyc07g054090.2.1	Tomato	cytosol, mitochondrion, plastid	24.92	31.64
PGSC0003DMT400047255	Potato	cytosol, mitochondrion, plastid	24.92	31.33
Os07t0598500-01	Rice	mitochondrion	24.6	30.43
Os04t0544400-00	Rice	plastid	24.44	29.94
CDY35213	Canola	cytosol	1.92	29.27
Bra011054.1-P	Field mustard	mitochondrion	15.5	28.45
CDY35212	Canola	mitochondrion	12.62	28.11
CDY65573	Canola	mitochondrion	16.61	28.11
Os01t0301700-01	Rice	mitochondrion	22.2	27.58
CDY27645	Canola	mitochondrion	11.34	27.41
Os12t0527900-01	Rice	mitochondrion	22.36	27.24
Os01t0301000-01	Rice	mitochondrion	22.04	26.44
Os02t0796400-00	Rice	mitochondrion	21.73	26.31
AT1G28020.1	Thale cress	cytosol, plastid	20.61	26.11
CDY71968	Canola	plastid	11.82	25.34
CDY00734	Canola	mitochondrion	7.03	24.86
Os04t0320200-01	Rice	mitochondrion	20.61	24.62
Os01t0301500-01	Rice	cytosol, mitochondrion	19.01	24.59
AT1G43010.1	Thale cress	mitochondrion	9.74	23.74
Os04t0450200-01	Rice	cytosol	10.86	23.29
AT3G11380.1	Thale cress	mitochondrion	19.81	22.92
CDY05786	Canola	plastid	17.73	22.89
CDY31943	Canola	plastid	17.41	22.47
Bra036496.1-P	Field mustard	plastid	17.41	22.47
Bra032862.1-P	Field mustard	mitochondrion	12.94	21.37
CDY48421	Canola	mitochondrion	14.06	21.31
AT3G11350.1	Thale cress	mitochondrion	11.98	20.89
Os12t0170100-01	Rice	mitochondrion	20.29	20.79
Bra032863.1-P	Field mustard	mitochondrion	13.26	20.75
Os01t0280400-00	Rice	mitochondrion	20.13	20.62
AT1G28000.1	Thale cress	mitochondrion	12.62	20.36
CDY27647	Canola	mitochondrion	13.1	20.15
AT2G20720.1	Thale cress	cytosol	9.58	20.07
Bra032865.1-P	Field mustard	cytosol	16.45	17.94
CDY53324	Canola	mitochondrion, plastid	20.45	17.51
Bra001400.1-P	Field mustard	mitochondrion, plastid	20.93	17.49
CDY53325	Canola	mitochondrion	18.69	16.76
CDX73880	Canola	mitochondrion	12.3	15.37
CDY66759	Canola	cytosol	16.93	14.19
Bra032866.1-P	Field mustard	mitochondrion	14.06	13.79
Os07t0222700-01	Rice	mitochondrion	2.24	7.07

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0P0XWF9	ProteinID:BAT11528.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlantsGene:Os10g0501200	EnsemblPlants:Os10t0501200-00	PFAM:PF01535	PFscan:PS51375	PANTHER:PTHR24015
PANTHER:PTHR24015:SF625	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000393BC62
SEG:seg	:	:	:	:	:

Description

pentatricopeptide repeat motif containing gene 9, PPR motif-containing gene 9Pentatricopeptide repeat domain containing protein. (Os10t0501200-00)

Coordinates

chr10:+:19108715..19110695

Molecular Weight (calculated)

70730.3 Da

IEP (calculated)

7.820

GRAVY (calculated)

-0.349

Length

626 amino acids

Sequence
(BLAST)

001: MPCAARRGGD RGIAVHARAI FDWARWASLI RCYRSWACPL RVAIDALSFF LFYYFFCDFL PLSPPKTLAP TSPERRRRPP TMLLHRRGLL LRGGGGLLRR
101: LSVAVEESVS PSPPPPPPRQ PQEDSVDDEE TASPSPGKPQ EGSVAAEERA SPSPPPPRRK KDSLFRRVAA AADPRLPLSP VLEQWCLAEE RPIAKPEIQS
201: IIKYLCRRRR FSQALQLSMW MTERLHLHLS PGDVAYRLEL ITKVHGLDRA VEYFDSMPDQ LKQQQCYGSL LKCYAEAKCV EKAEELFEKM RGMGMASSYA
301: YNVMMRLYLQ DGQVERVHSM HRTMEESGIV ADVFTTDTLV AAYVVAEDIE AIEKVLEKAD TCNDLMTWHS YATIGKVLMQ SGMEERALQA FQESEKKIAK
401: KSNRVAYGFL LTMYADLGMN SEVDRIWDVY KSKVPASACN SMYMCRISVL LKMNDIVGAE KAYEEWESKH VYHDSRLINL LLTAYCKEGL MEKAEALVDQ
501: FVKKGRTPFG NTWYKLAGGY FKVGQASKAA DLTKKALASG SNEWTPDLTN VLMSLNYFAE QKNVEAAEEM ASLLQRLITP TRDIYHGLLK TYVNAGKPVS
601: DLLDRMKKDG MEADEETEKI LAGEVH

Best Arabidopsis Sequence Match ( AT2G20710.1 )
(BLAST)

001: MKHLLLLRLV LPKPNYILRR SFLFHSGKTT PSPLDPYDTL QRRVARSGDP SASIIKVLDG WLDQGNLVKT SELHSIIKML RKFSRFSHAL QISDWMSEHR
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.