Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27645 | Canola | mitochondrion | 42.27 | 63.32 |
| Bra032862.1-P | Field mustard | mitochondrion | 60.31 | 61.74 |
| Bra032863.1-P | Field mustard | mitochondrion | 61.08 | 59.25 |
| CDY48421 | Canola | mitochondrion | 62.11 | 58.35 |
| CDY27647 | Canola | mitochondrion | 60.57 | 57.74 |
| AT1G43010.1 | Thale cress | mitochondrion | 25.77 | 38.91 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 35.05 | 27.53 |
| AT3G11350.1 | Thale cress | mitochondrion | 21.39 | 23.12 |
| AT3G11380.1 | Thale cress | mitochondrion | 31.19 | 22.37 |
| AT2G20710.1 | Thale cress | mitochondrion | 27.58 | 21.84 |
| VIT_12s0028g03870.t01 | Wine grape | cytosol, mitochondrion | 25.52 | 19.84 |
| PGSC0003DMT400047255 | Potato | cytosol, mitochondrion, plastid | 24.74 | 19.28 |
| Solyc07g054090.2.1 | Tomato | cytosol, mitochondrion, plastid | 24.48 | 19.27 |
| KRH22399 | Soybean | cytosol | 20.62 | 16.81 |
| KRH26940 | Soybean | cytosol | 21.39 | 16.73 |
| AT1G02150.1 | Thale cress | mitochondrion | 22.16 | 16.41 |
| AT4G21705.1 | Thale cress | mitochondrion | 20.36 | 16.06 |
| Solyc07g054100.1.1 | Tomato | cytosol | 13.14 | 15.79 |
| AT5G09450.1 | Thale cress | mitochondrion | 16.49 | 15.65 |
| Os10t0501300-01 | Rice | mitochondrion | 20.62 | 15.59 |
| OQU91552 | Sorghum | mitochondrion | 20.36 | 15.49 |
| PGSC0003DMT400047256 | Potato | extracellular | 12.89 | 15.48 |
| GSMUA_Achr5P20750_001 | Banana | mitochondrion | 21.39 | 15.2 |
| Zm00001d032543_P001 | Maize | mitochondrion | 19.85 | 14.89 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 18.3 | 14.46 |
| TraesCS1B01G188200.1 | Wheat | mitochondrion | 18.3 | 14.43 |
| Os10t0501000-01 | Rice | cytosol | 16.49 | 14.19 |
| TraesCS1D01G166700.1 | Wheat | mitochondrion | 17.78 | 13.94 |
| AT4G02820.1 | Thale cress | mitochondrion | 19.07 | 13.91 |
| AT4G01990.1 | Thale cress | mitochondrion | 17.78 | 13.74 |
| AT1G60770.1 | Thale cress | cytosol | 16.75 | 13.24 |
| Os10t0501200-00 | Rice | mitochondrion | 20.36 | 12.62 |
| TraesCS1A01G168700.1 | Wheat | mitochondrion | 18.81 | 12.5 |
| AT2G20720.1 | Thale cress | cytosol | 9.28 | 12.04 |
| AT1G15480.1 | Thale cress | mitochondrion | 17.78 | 11.62 |
| AT1G02370.1 | Thale cress | mitochondrion | 15.98 | 11.55 |
| AT3G15590.2 | Thale cress | cytosol, mitochondrion | 16.49 | 10.49 |
| AT1G80270.2 | Thale cress | mitochondrion | 15.72 | 10.23 |
| AT1G07590.1 | Thale cress | mitochondrion | 12.89 | 9.36 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:839693 | ProteinID:AEE30900.1 | ArrayExpress:AT1G28000 | EnsemblPlantsGene:AT1G28000 |
| RefSeq:AT1G28000 | TAIR:AT1G28000 | RefSeq:AT1G28000-TAIR-G | EnsemblPlants:AT1G28000.1 | TAIR:AT1G28000.1 | Unigene:At.65936 |
| UniProt:F4HUV0 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR011990 | RefSeq:NP_174121.2 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF644 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI0001738FFB | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HUV0]
Coordinates
chr1:-:9756674..9757963
Molecular Weight (calculated)
43088.7 Da
IEP (calculated)
7.752
GRAVY (calculated)
-0.435
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCLGRYAIK NLLSRRLPSI RFAGTLTSPK LNETSHSRIM ALGREQKKVT PPLDEWLKRG KDLNPAVLRG LINSLCESQR FNHALQVSEW ITKRGIFDLS
101: TEDFASRLCL VEISTGLKEA EKFFKSIPEN MRDDSVHTTL LSLYTISKKT RHEAEATYQT MRVQNMLLKP YPYYSMIYLY ALLGEKNMID EILRQMKENG
201: VEHDKNLTAN NVLKAYASLP DVEAMEMFLM GLEVEEPRFS LAWQTGISIA KAYLKGGSSR KAVEMLRRTE LVVDTKSKDS ANKVLMMMYW DAGAKQDASR
301: LSRLIYPKSK KGKRMKAYDE KIESYGGDSS DPIIFIDNRR DCGSVGDGDG DVDVDVDVDV DDGFSGSSDG GASCGGGGCG GGGCGGGD
101: TEDFASRLCL VEISTGLKEA EKFFKSIPEN MRDDSVHTTL LSLYTISKKT RHEAEATYQT MRVQNMLLKP YPYYSMIYLY ALLGEKNMID EILRQMKENG
201: VEHDKNLTAN NVLKAYASLP DVEAMEMFLM GLEVEEPRFS LAWQTGISIA KAYLKGGSSR KAVEMLRRTE LVVDTKSKDS ANKVLMMMYW DAGAKQDASR
301: LSRLIYPKSK KGKRMKAYDE KIESYGGDSS DPIIFIDNRR DCGSVGDGDG DVDVDVDVDV DDGFSGSSDG GASCGGGGCG GGGCGGGD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.