Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03299 | Canola | mitochondrion | 79.59 | 82.45 |
| Bra036673.1-P | Field mustard | mitochondrion | 80.0 | 82.01 |
| CDY39781 | Canola | mitochondrion | 79.59 | 81.59 |
| VIT_12s0028g03870.t01 | Wine grape | cytosol, mitochondrion | 41.43 | 40.68 |
| Solyc07g054100.1.1 | Tomato | cytosol | 25.71 | 39.01 |
| PGSC0003DMT400047256 | Potato | extracellular | 25.31 | 38.39 |
| PGSC0003DMT400047255 | Potato | cytosol, mitochondrion, plastid | 38.57 | 37.95 |
| Solyc07g054090.2.1 | Tomato | cytosol, mitochondrion, plastid | 37.76 | 37.53 |
| KRH22399 | Soybean | cytosol | 35.92 | 36.97 |
| KRH26940 | Soybean | cytosol | 35.71 | 35.28 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 33.27 | 33.0 |
| Os10t0501300-01 | Rice | mitochondrion | 34.08 | 32.55 |
| TraesCS1B01G188200.1 | Wheat | mitochondrion | 32.65 | 32.52 |
| AT1G43010.1 | Thale cress | mitochondrion | 16.73 | 31.91 |
| TraesCS1D01G166700.1 | Wheat | mitochondrion | 31.84 | 31.52 |
| OQU91552 | Sorghum | mitochondrion | 32.45 | 31.18 |
| GSMUA_Achr5P20750_001 | Banana | mitochondrion | 34.69 | 31.14 |
| AT2G20720.1 | Thale cress | cytosol | 18.98 | 31.1 |
| Os10t0501000-01 | Rice | cytosol | 27.55 | 29.93 |
| AT4G21705.1 | Thale cress | mitochondrion | 29.39 | 29.27 |
| AT4G02820.1 | Thale cress | mitochondrion | 31.22 | 28.76 |
| Zm00001d032543_P001 | Maize | mitochondrion | 30.2 | 28.63 |
| AT3G11380.1 | Thale cress | mitochondrion | 30.61 | 27.73 |
| AT1G28000.1 | Thale cress | mitochondrion | 21.84 | 27.58 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 27.35 | 27.29 |
| AT1G02150.1 | Thale cress | mitochondrion | 29.18 | 27.29 |
| TraesCS1A01G168700.1 | Wheat | mitochondrion | 32.45 | 27.23 |
| Os10t0501200-00 | Rice | mitochondrion | 34.08 | 26.68 |
| AT1G60770.1 | Thale cress | cytosol | 25.71 | 25.66 |
| AT5G09450.1 | Thale cress | mitochondrion | 20.82 | 24.94 |
| AT4G01990.1 | Thale cress | mitochondrion | 25.31 | 24.7 |
| AT3G11350.1 | Thale cress | mitochondrion | 17.76 | 24.23 |
| AT1G02370.1 | Thale cress | mitochondrion | 24.9 | 22.72 |
| AT1G15480.1 | Thale cress | mitochondrion | 24.9 | 20.54 |
| AT1G80270.2 | Thale cress | mitochondrion | 24.69 | 20.3 |
| AT3G15590.2 | Thale cress | cytosol, mitochondrion | 24.08 | 19.34 |
| AT1G07590.1 | Thale cress | mitochondrion | 20.0 | 18.35 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:816599 | ProteinID:AAD20924.1 | ProteinID:AEC07059.1 | ProteinID:AEC07060.1 |
| ArrayExpress:AT2G20710 | EnsemblPlantsGene:AT2G20710 | RefSeq:AT2G20710 | TAIR:AT2G20710 | RefSeq:AT2G20710-TAIR-G | EnsemblPlants:AT2G20710.1 |
| TAIR:AT2G20710.1 | Unigene:At.39655 | EMBL:BT015322 | EMBL:BT029763 | EMBL:BX819495 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_179663.1 | RefSeq:NP_973492.1 |
| PFAM:PF01535 | PFAM:PF13041 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF644 | InterPro:Pentatricopeptide_repeat |
| UniProt:Q9SKU6 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A9D0B | SEG:seg |
Description
Pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU6]
Coordinates
chr2:+:8925926..8927844
Molecular Weight (calculated)
56830.4 Da
IEP (calculated)
8.577
GRAVY (calculated)
-0.335
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHLLLLRLV LPKPNYILRR SFLFHSGKTT PSPLDPYDTL QRRVARSGDP SASIIKVLDG WLDQGNLVKT SELHSIIKML RKFSRFSHAL QISDWMSEHR
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.