Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00734 | Canola | mitochondrion | 17.74 | 54.24 |
| AT3G11350.1 | Thale cress | mitochondrion | 34.2 | 51.53 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 46.4 | 50.81 |
| CDY53325 | Canola | mitochondrion | 61.74 | 47.85 |
| AT1G43010.1 | Thale cress | mitochondrion | 20.15 | 42.41 |
| CDY66759 | Canola | cytosol | 51.94 | 37.62 |
| AT1G28000.1 | Thale cress | mitochondrion | 22.37 | 31.19 |
| AT2G20710.1 | Thale cress | mitochondrion | 27.73 | 30.61 |
| VIT_12s0028g03870.t01 | Wine grape | cytosol, mitochondrion | 23.66 | 25.65 |
| AT4G21705.1 | Thale cress | mitochondrion | 22.92 | 25.2 |
| Solyc07g054100.1.1 | Tomato | cytosol | 14.97 | 25.08 |
| Os10t0501300-01 | Rice | mitochondrion | 23.66 | 24.95 |
| Solyc07g054090.2.1 | Tomato | cytosol, mitochondrion, plastid | 22.55 | 24.75 |
| OQU91552 | Sorghum | mitochondrion | 23.29 | 24.71 |
| PGSC0003DMT400047255 | Potato | cytosol, mitochondrion, plastid | 22.74 | 24.7 |
| Os10t0501000-01 | Rice | cytosol | 20.15 | 24.17 |
| GSMUA_Achr5P20750_001 | Banana | mitochondrion | 24.21 | 23.99 |
| KRH26940 | Soybean | cytosol | 22.0 | 23.99 |
| PGSC0003DMT400047256 | Potato | extracellular | 14.23 | 23.84 |
| TraesCS1D01G166700.1 | Wheat | mitochondrion | 21.81 | 23.84 |
| TraesCS1B01G188200.1 | Wheat | mitochondrion | 21.63 | 23.78 |
| KRH22399 | Soybean | cytosol | 20.33 | 23.11 |
| Zm00001d032543_P001 | Maize | mitochondrion | 21.81 | 22.82 |
| AT1G02150.1 | Thale cress | mitochondrion | 22.0 | 22.71 |
| AT5G09450.1 | Thale cress | mitochondrion | 17.01 | 22.49 |
| AT4G02820.1 | Thale cress | mitochondrion | 21.44 | 21.8 |
| AT1G60770.1 | Thale cress | cytosol | 19.59 | 21.59 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 18.67 | 20.57 |
| TraesCS1A01G168700.1 | Wheat | mitochondrion | 22.18 | 20.55 |
| Os10t0501200-00 | Rice | mitochondrion | 22.92 | 19.81 |
| AT4G01990.1 | Thale cress | mitochondrion | 18.3 | 19.72 |
| AT1G02370.1 | Thale cress | mitochondrion | 17.38 | 17.5 |
| AT1G80270.2 | Thale cress | mitochondrion | 17.93 | 16.28 |
| AT1G15480.1 | Thale cress | mitochondrion | 17.74 | 16.16 |
| AT1G07590.1 | Thale cress | mitochondrion | 15.9 | 16.1 |
| AT2G20720.1 | Thale cress | cytosol | 8.69 | 15.72 |
| AT3G15590.2 | Thale cress | cytosol, mitochondrion | 17.56 | 15.57 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:820310 | ProteinID:AAG51439.1 | ProteinID:AEE75035.1 | ArrayExpress:AT3G11380 |
| EnsemblPlantsGene:AT3G11380 | RefSeq:AT3G11380 | TAIR:AT3G11380 | RefSeq:AT3G11380-TAIR-G | EnsemblPlants:AT3G11380.1 | TAIR:AT3G11380.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 |
| GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_187745.1 | PFAM:PF01535 | PFAM:PF13812 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF1657 | InterPro:Pentatricopeptide_repeat | UniProt:Q9CAY6 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A804A | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAY6]
Coordinates
chr3:+:3564079..3565779
Molecular Weight (calculated)
62198.9 Da
IEP (calculated)
8.905
GRAVY (calculated)
-0.505
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMRHNLQRH AKRILAYSNR PRFFCSYTNV TLSSPATNQT LQSRIEAASH QKAEITTVLE QWLQQQQQQG KQLNPSLLRG IVEKLRSSNR PRQALEVSDW
101: MVEQKMYNLP EDFSARFHLT EKVLNLEEAE KFFESIPENM RFESMYNSLL RSYARQSGEK ALKKAESVFK KMKKLGLLLR PSPYNSMTSL YSSLGNRDKV
201: DEILREMKEN NVELDNVTVN NALRVYAAVS DVATMDKFLA DRKEITRLDG LTMLAMAKAY ELMSLYGEAG EIEDVHRVWD KYKATRQKDN EEFRTLIGSL
301: LKLGDTKGAE KIYYNEWECS GLEFDNRIPD MLVSGYREKG MVMKADKLVN KTLWIRGLAT PITLLLEEMD KKGNKVSPPG LRDLIKNLRD SNQLSKALEA
401: STWMCQKKVF NLFSEDYATR LHLTEKVLGL EEAENFFESS IPENMKDYSV YDTLLSCYAR SSNTQSKAEA VFEKMRELGL QSKLSPFNSL ISLYSGQGKL
501: SVVNILLCDM KHKNIEPDIV TRNNVLRANA YILAIDSMEK V
101: MVEQKMYNLP EDFSARFHLT EKVLNLEEAE KFFESIPENM RFESMYNSLL RSYARQSGEK ALKKAESVFK KMKKLGLLLR PSPYNSMTSL YSSLGNRDKV
201: DEILREMKEN NVELDNVTVN NALRVYAAVS DVATMDKFLA DRKEITRLDG LTMLAMAKAY ELMSLYGEAG EIEDVHRVWD KYKATRQKDN EEFRTLIGSL
301: LKLGDTKGAE KIYYNEWECS GLEFDNRIPD MLVSGYREKG MVMKADKLVN KTLWIRGLAT PITLLLEEMD KKGNKVSPPG LRDLIKNLRD SNQLSKALEA
401: STWMCQKKVF NLFSEDYATR LHLTEKVLGL EEAENFFESS IPENMKDYSV YDTLLSCYAR SSNTQSKAEA VFEKMRELGL QSKLSPFNSL ISLYSGQGKL
501: SVVNILLCDM KHKNIEPDIV TRNNVLRANA YILAIDSMEK V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.