Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22399 | Soybean | cytosol | 87.1 | 90.76 |
| VIT_12s0028g03870.t01 | Wine grape | cytosol, mitochondrion | 42.14 | 41.88 |
| Solyc07g054100.1.1 | Tomato | cytosol | 27.02 | 41.49 |
| PGSC0003DMT400047256 | Potato | extracellular | 26.61 | 40.87 |
| CDY35213 | Canola | cytosol | 3.23 | 39.02 |
| PGSC0003DMT400047255 | Potato | cytosol, mitochondrion, plastid | 38.31 | 38.15 |
| Solyc07g054090.2.1 | Tomato | cytosol, mitochondrion, plastid | 37.7 | 37.93 |
| CDY39781 | Canola | mitochondrion | 34.68 | 35.98 |
| Bra036673.1-P | Field mustard | mitochondrion | 34.48 | 35.77 |
| CDY03299 | Canola | mitochondrion | 34.07 | 35.73 |
| AT2G20710.1 | Thale cress | mitochondrion | 35.28 | 35.71 |
| Os10t0501300-01 | Rice | mitochondrion | 32.06 | 30.99 |
| Os10t0501000-01 | Rice | cytosol | 27.22 | 29.93 |
| TraesCS1B01G188200.1 | Wheat | mitochondrion | 29.44 | 29.67 |
| CDY65573 | Canola | mitochondrion | 21.98 | 29.46 |
| Bra011054.1-P | Field mustard | mitochondrion | 20.16 | 29.33 |
| KRH69203 | Soybean | cytosol | 22.98 | 29.31 |
| GSMUA_Achr5P20750_001 | Banana | mitochondrion | 32.26 | 29.3 |
| KRH55328 | Soybean | plastid | 29.03 | 29.27 |
| CDY35212 | Canola | mitochondrion | 16.53 | 29.18 |
| OQU91552 | Sorghum | mitochondrion | 29.64 | 28.82 |
| TraesCS1D01G166700.1 | Wheat | mitochondrion | 28.63 | 28.69 |
| KRH10858 | Soybean | mitochondrion | 27.82 | 28.4 |
| KRH48889 | Soybean | plastid | 31.05 | 28.21 |
| Zm00001d032543_P001 | Maize | mitochondrion | 29.23 | 28.05 |
| KRH31780 | Soybean | mitochondrion | 26.41 | 27.52 |
| CDY27645 | Canola | mitochondrion | 14.31 | 27.41 |
| KRH52991 | Soybean | mitochondrion | 27.02 | 27.02 |
| KRH66454 | Soybean | plastid | 29.64 | 26.49 |
| CDY71968 | Canola | plastid | 15.52 | 26.37 |
| Os10t0501200-00 | Rice | mitochondrion | 32.66 | 25.88 |
| KRH45616 | Soybean | nucleus | 25.2 | 25.51 |
| TraesCS1A01G168700.1 | Wheat | mitochondrion | 29.23 | 24.83 |
| KRH43872 | Soybean | mitochondrion | 19.76 | 24.81 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 24.6 | 24.7 |
| AT1G43010.1 | Thale cress | mitochondrion | 12.7 | 24.51 |
| KRG99413 | Soybean | cytosol, mitochondrion | 17.14 | 24.22 |
| KRH10583 | Soybean | mitochondrion | 19.15 | 23.81 |
| CDY05786 | Canola | plastid | 22.78 | 23.3 |
| Bra032862.1-P | Field mustard | mitochondrion | 17.74 | 23.22 |
| KRH62276 | Soybean | mitochondrion | 26.81 | 23.13 |
| Bra036496.1-P | Field mustard | plastid | 22.58 | 23.09 |
| CDY31943 | Canola | plastid | 22.58 | 23.09 |
| KRH66764 | Soybean | cytosol | 19.15 | 22.89 |
| CDY00734 | Canola | mitochondrion | 7.86 | 22.03 |
| AT3G11380.1 | Thale cress | mitochondrion | 23.99 | 22.0 |
| AT3G11350.1 | Thale cress | mitochondrion | 15.73 | 21.73 |
| AT1G28000.1 | Thale cress | mitochondrion | 16.73 | 21.39 |
| Bra032863.1-P | Field mustard | mitochondrion | 17.14 | 21.25 |
| CDY27647 | Canola | mitochondrion | 17.34 | 21.13 |
| CDY48421 | Canola | mitochondrion | 17.34 | 20.82 |
| AT2G20720.1 | Thale cress | cytosol | 12.5 | 20.74 |
| KRH10262 | Soybean | mitochondrion | 19.35 | 18.93 |
| KRH23068 | Soybean | mitochondrion | 19.15 | 18.74 |
| KRH31614 | Soybean | mitochondrion | 22.38 | 18.5 |
| KRH69049 | Soybean | mitochondrion | 22.58 | 18.39 |
| KRG95098 | Soybean | mitochondrion | 22.18 | 18.03 |
| Bra032865.1-P | Field mustard | cytosol | 20.56 | 17.77 |
| Bra001400.1-P | Field mustard | mitochondrion, plastid | 25.0 | 16.56 |
| CDY53325 | Canola | mitochondrion | 22.98 | 16.33 |
| CDY53324 | Canola | mitochondrion, plastid | 23.99 | 16.28 |
| CDX73880 | Canola | mitochondrion | 15.93 | 15.77 |
| CDY66759 | Canola | cytosol | 19.56 | 12.99 |
| Bra032866.1-P | Field mustard | mitochondrion | 16.13 | 12.54 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100818231 | MapMan:35.1 | EMBL:ACUP02007760 | EnsemblPlantsGene:GLYMA_12G203800 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | UniProt:K7LW25 | EnsemblPlants:KRH26940 | ProteinID:KRH26940 | ProteinID:KRH26940.1 |
| PFAM:PF01535 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF644 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000296B9D1 | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:36416357..36419048
Molecular Weight (calculated)
56792.2 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.332
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMLIRSKCK LVKMCGVCVC GSLEMCMYST ESVVASLENR VFKVGDPVIP VSPILKQWVE EGREVTKLQL ENLVYRLTQS RRFTHALQVL EWMSNERNYE
101: LSPGNIAKQI NLISKVRGLE QAEKYFRGIP DAKIEFKIYA ALLRCYAEHK SVEEAEAVLK KIKELHPVNI TACCNMMLEL YAKKGKYEKL DRLMQEMKEK
201: DICNAGTYTI RLNAYVIATD IKGMEKLLMQ MEVDPMATVD WYTYMTAANG YRKVHNFEKV AAMLKKSEHV ARGKTKRLAY ESIQTMYAII GNKDEVHRLW
301: NMCTSPKKPN KSYIRMLSSL VKLDDIDGAE KILEEWESVH ENFDVRIPNL MISAYCKWGQ FDKAEAYIRR LLDGGKHLDG RTWDRLACGY NAGNDMENAV
401: QAMKKAVSTN LAGRRPDPFT LVACVKYLKE KGDLDLALEI LKLCIENSHI SVTSYDGLVS YVRSETETPD TEPLDLIKGD YQMFENENTQ LLGGEN
101: LSPGNIAKQI NLISKVRGLE QAEKYFRGIP DAKIEFKIYA ALLRCYAEHK SVEEAEAVLK KIKELHPVNI TACCNMMLEL YAKKGKYEKL DRLMQEMKEK
201: DICNAGTYTI RLNAYVIATD IKGMEKLLMQ MEVDPMATVD WYTYMTAANG YRKVHNFEKV AAMLKKSEHV ARGKTKRLAY ESIQTMYAII GNKDEVHRLW
301: NMCTSPKKPN KSYIRMLSSL VKLDDIDGAE KILEEWESVH ENFDVRIPNL MISAYCKWGQ FDKAEAYIRR LLDGGKHLDG RTWDRLACGY NAGNDMENAV
401: QAMKKAVSTN LAGRRPDPFT LVACVKYLKE KGDLDLALEI LKLCIENSHI SVTSYDGLVS YVRSETETPD TEPLDLIKGD YQMFENENTQ LLGGEN
001: MKHLLLLRLV LPKPNYILRR SFLFHSGKTT PSPLDPYDTL QRRVARSGDP SASIIKVLDG WLDQGNLVKT SELHSIIKML RKFSRFSHAL QISDWMSEHR
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI
101: VHEISEGDVA IRLDLIAKVG GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM LNLYVRTGKY TMVEKLLREM
201: EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301: YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK
401: MEKAVEKWKR AIEVSKPGWR PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG RYVEEREVRI
Arabidopsis Description
Pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.