CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66454	Soybean	plastid	90.66	89.19
VIT_15s0021g01300.t01	Wine grape	plastid	58.61	60.72
Bra033215.1-P	Field mustard	mitochondrion	54.95	58.59
CDY15126	Canola	cytosol, mitochondrion, plastid	54.95	58.59
CDX90079	Canola	mitochondrion	54.76	58.4
Solyc01g089870.2.1	Tomato	nucleus	58.06	58.17
PGSC0003DMT400080049	Potato	cytosol, plastid	57.51	57.61
AT1G02150.1	Thale cress	mitochondrion	55.13	57.44
GSMUA_AchrUn_...	Banana	cytosol	34.98	51.21
Os04t0544400-00	Rice	plastid	40.84	43.64
TraesCS2A01G391600.1	Wheat	plastid	39.19	42.54
EES12592	Sorghum	plastid	40.11	42.52
TraesCS2D01G389900.1	Wheat	plastid	39.74	42.47
TraesCS2B01G410100.1	Wheat	plastid	39.38	42.32
Zm00001d002789_P001	Maize	plastid	39.56	42.11
HORVU2Hr1G093220.7	Barley	mitochondrion	39.93	41.6
KRH10858	Soybean	mitochondrion	28.39	31.89
KRH69203	Soybean	cytosol	22.71	31.88
KRH31780	Soybean	mitochondrion	27.47	31.51
KRH22399	Soybean	cytosol	27.29	31.3
KRH26940	Soybean	cytosol	28.21	31.05
KRH45616	Soybean	nucleus	26.37	29.39
KRH55328	Soybean	plastid	26.37	29.27
KRH52991	Soybean	mitochondrion	25.46	28.02
KRG99413	Soybean	cytosol, mitochondrion	17.03	26.5
KRH10583	Soybean	mitochondrion	19.23	26.32
KRH43872	Soybean	mitochondrion	18.68	25.82
KRH62276	Soybean	mitochondrion	25.82	24.52
KRH66764	Soybean	cytosol	18.13	23.86
KRH23068	Soybean	mitochondrion	19.23	20.71
KRH10262	Soybean	mitochondrion	18.86	20.32
KRH69049	Soybean	mitochondrion	22.34	20.03
KRG95098	Soybean	mitochondrion	21.98	19.67
KRH31614	Soybean	mitochondrion	21.06	19.17

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100777139	MapMan:35.1	EMBL:ACUP02004305	EnsemblPlantsGene:GLYMA_07G119200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7L135	EnsemblPlants:KRH48889	ProteinID:KRH48889	ProteinID:KRH48889.1
PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF27
InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002337F11	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:13613091..13618205

Molecular Weight (calculated)

62512.5 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.390

Length

546 amino acids

Sequence
(BLAST)

001: MSLLRIQPSL SLHNQTLSLS FSSSLSYSSS VLFKHSTITH GHTQSLCFYH PRLSVVTTCS ISKIHSYGTV DYERRPIVGW NDVYRRISLN PNPQVGSAEV
101: LNQWENEGRH LTKWELSRVV KELRKYKRFR RALEVYDWMN NRPERFRVSE SDAAIQLDLI AKVRGLSSAE AFFLSLEDKL KDKKTYGALL NVYVHSRSKE
201: KAESLFDTMR SKGYVIHALP FNVMMTLYMN LNEYAKVDIL ASEMMEKNIQ LDIYTYNIWL SSCGSQGSVE KMEQVFEQME KDPSIIPNWS TFSTMASMYI
301: RMDQNEKAEE CLRKVEGRIK GRDRIPFHYL LSLYGSVGKK DEVCRVWNTY KSIFPSIPNL GYHAIISSLV KLDDIEVAEK LYEEWISVKS SYDPRIGNLL
401: IGWYVKKGDT DKALSFFEQM LNDGCIPNSN TWEILSEGHI ADKRISEAMS CLKEAFMAAG GSKSWRPKPS YLSAFLELCQ EQDDMESAEV LIGLLRQSKF
501: NKSKVYASLI GSSDELPKID TADRTDDAVD SENMDNDLLN QLGSSS

Best Arabidopsis Sequence Match ( AT1G02150.1 )
(BLAST)

001: MLLQAAVQNR NVPLASSASY SRLLRCRSPV VSVAALSKKT AAIVCSISQV YGYGTVDYER RPIVQWNAIY KKISLMEKPE LGAASVLNQW EKAGRKLTKW
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02150 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.