Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39654 | Canola | mitochondrion | 76.6 | 75.71 |
| AT1G80270.2 | Thale cress | mitochondrion | 64.31 | 64.09 |
| KRH66764 | Soybean | cytosol | 39.06 | 55.9 |
| VIT_08s0007g05090.t01 | Wine grape | mitochondrion | 55.89 | 53.21 |
| KRH69049 | Soybean | mitochondrion | 52.02 | 50.74 |
| GSMUA_Achr5P27560_001 | Banana | cytosol | 43.43 | 50.29 |
| GSMUA_Achr8P21680_001 | Banana | mitochondrion | 51.68 | 49.68 |
| KRH31614 | Soybean | mitochondrion | 50.0 | 49.5 |
| Bra026128.1-P | Field mustard | cytosol | 75.42 | 48.12 |
| KRG95098 | Soybean | mitochondrion | 49.33 | 48.03 |
| PGSC0003DMT400022632 | Potato | mitochondrion | 49.33 | 46.96 |
| Solyc12g020050.1.1 | Tomato | plastid | 49.16 | 46.79 |
| TraesCS3D01G195000.1 | Wheat | mitochondrion | 45.79 | 44.37 |
| TraesCS3B01G220600.2 | Wheat | mitochondrion | 45.62 | 44.21 |
| HORVU3Hr1G040710.1 | Barley | mitochondrion | 45.12 | 43.79 |
| AT3G15590.2 | Thale cress | cytosol, mitochondrion | 44.78 | 43.61 |
| TraesCS3A01G191200.1 | Wheat | mitochondrion | 44.78 | 43.46 |
| OQU86720 | Sorghum | mitochondrion | 44.44 | 43.07 |
| PGSC0003DMT400021596 | Potato | mitochondrion | 43.77 | 42.41 |
| Os01t0280400-00 | Rice | mitochondrion | 43.43 | 42.23 |
| Zm00001d008224_P002 | Maize | mitochondrion | 44.11 | 42.12 |
| Zm00001d040475_P001 | Maize | mitochondrion | 43.27 | 41.92 |
| Os12t0170100-01 | Rice | mitochondrion | 43.1 | 41.9 |
| GSMUA_Achr11P... | Banana | mitochondrion | 43.94 | 41.56 |
| AT1G43010.1 | Thale cress | mitochondrion | 10.77 | 24.9 |
| AT2G20710.1 | Thale cress | mitochondrion | 20.54 | 24.9 |
| AT1G60770.1 | Thale cress | cytosol | 20.37 | 24.64 |
| AT4G02820.1 | Thale cress | mitochondrion | 20.71 | 23.12 |
| AT5G27460.1 | Thale cress | cytosol, mitochondrion, plastid | 18.35 | 22.2 |
| AT4G21705.1 | Thale cress | mitochondrion | 18.35 | 22.15 |
| AT1G07590.1 | Thale cress | mitochondrion | 19.02 | 21.16 |
| AT1G02150.1 | Thale cress | mitochondrion | 18.01 | 20.42 |
| AT1G28020.1 | Thale cress | cytosol, plastid | 15.99 | 19.23 |
| AT4G01990.1 | Thale cress | mitochondrion | 16.16 | 19.12 |
| AT1G02370.1 | Thale cress | mitochondrion | 16.5 | 18.25 |
| AT5G09450.1 | Thale cress | mitochondrion | 12.46 | 18.09 |
| AT1G28000.1 | Thale cress | mitochondrion | 11.62 | 17.78 |
| AT3G11380.1 | Thale cress | mitochondrion | 16.16 | 17.74 |
| AT2G20720.1 | Thale cress | cytosol | 7.74 | 15.38 |
| AT3G11350.1 | Thale cress | mitochondrion | 8.25 | 13.65 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:16.12.5.4.19 | EntrezGene:838118 | ProteinID:AAD39676.1 | ProteinID:AEE29328.1 | ArrayExpress:AT1G15480 |
| EnsemblPlantsGene:AT1G15480 | RefSeq:AT1G15480 | TAIR:AT1G15480 | RefSeq:AT1G15480-TAIR-G | EnsemblPlants:AT1G15480.1 | TAIR:AT1G15480.1 |
| Unigene:At.41932 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 |
| GO:GO:0009536 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR002885 |
| InterPro:IPR011990 | RefSeq:NP_173001.2 | PFAM:PF01535 | PFAM:PF13812 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF26 | InterPro:Pentatricopeptide_repeat | UniProt:Q9XI21 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI0001505788 | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein At1g15480, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XI21]
Coordinates
chr1:+:5317973..5320630
Molecular Weight (calculated)
67535.9 Da
IEP (calculated)
6.861
GRAVY (calculated)
-0.484
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MFALSKVLRR SQSLRLGACN AVYSKLDIPL GERNIAIESN ALIHDKHEAL PRFYELSWSS STGRRSLSSD AGAKTTGDDD DLEDKNVDLA TPDETSSDSE
101: DGEEFSGDEG DIEGAELELH VPESKRPSEM FKAIVSVSGL SVGSALDKWV EQGKDTNRKE FESAMLQLRK RRMFGRALQM TEWLDENKQF EMEERDYACR
201: LDLISKVRGW YKGEAYIKTI PESFRGELVY RTLLANHVAT SNVRTAEAVF NKMKDLGFPL STFTCNQMLI LYKRVDKKKI ADVLLLLEKE NLKPNLNTYK
301: ILIDTKGSSN DITGMEQIVE TMKSEGVELD LRARALIARH YASAGLKEKA EKVLKEMEGE SLEENRHMCK DLLSVYGYLQ REDEVRRVWK ICEENPRYNE
401: VLAAILAFGK IDKVKDAEAV FEKVLKMSHR VSSNVYSVLL RVYVDHKMVS EGKDLVKQMS DSGCNIGALT WDAVIKLYVE AGEVEKAESS LSKAIQSKQI
501: KPLMSSFMYL MHEYVRRGDV HNTEKIFQRM KQAGYQSRFW AYQTLIQAYV NAKAPAYGMK ERMKADNIFP NKRLAAQLAK ADPFKKTPLS DLLD
101: DGEEFSGDEG DIEGAELELH VPESKRPSEM FKAIVSVSGL SVGSALDKWV EQGKDTNRKE FESAMLQLRK RRMFGRALQM TEWLDENKQF EMEERDYACR
201: LDLISKVRGW YKGEAYIKTI PESFRGELVY RTLLANHVAT SNVRTAEAVF NKMKDLGFPL STFTCNQMLI LYKRVDKKKI ADVLLLLEKE NLKPNLNTYK
301: ILIDTKGSSN DITGMEQIVE TMKSEGVELD LRARALIARH YASAGLKEKA EKVLKEMEGE SLEENRHMCK DLLSVYGYLQ REDEVRRVWK ICEENPRYNE
401: VLAAILAFGK IDKVKDAEAV FEKVLKMSHR VSSNVYSVLL RVYVDHKMVS EGKDLVKQMS DSGCNIGALT WDAVIKLYVE AGEVEKAESS LSKAIQSKQI
501: KPLMSSFMYL MHEYVRRGDV HNTEKIFQRM KQAGYQSRFW AYQTLIQAYV NAKAPAYGMK ERMKADNIFP NKRLAAQLAK ADPFKKTPLS DLLD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.