Factsheet for Os01t0301000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009122_P001	Maize	mitochondrion	73.56	74.56
EES02848	Sorghum	mitochondrion	74.71	73.58
TraesCS2A01G552700.1	Wheat	mitochondrion	74.71	70.78
TraesCS2B01G584000.2	Wheat	mitochondrion	74.33	70.16
TraesCS2D01G553300.1	Wheat	mitochondrion	75.1	70.0
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	64.94	67.66
Os01t0301500-01	Rice	cytosol, mitochondrion	56.13	60.54
GSMUA_Achr11P...	Banana	mitochondrion	51.72	52.02
PGSC0003DMT400023279	Potato	mitochondrion	40.42	42.63
VIT_07s0005g01630.t01	Wine grape	mitochondrion	37.16	41.1
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	37.36	40.21
VIT_14s0060g01120.t01	Wine grape	cytosol, mitochondrion	36.02	37.75
CDX91822	Canola	mitochondrion	35.63	37.2
Bra000902.1-P	Field mustard	mitochondrion	35.63	37.13
CDX90962	Canola	mitochondrion	35.63	37.13
AT4G01990.1	Thale cress	mitochondrion	35.06	36.45
CDY15237	Canola	mitochondrion	35.82	36.45
KRH31780	Soybean	mitochondrion	33.14	36.34
Bra033321.1-P	Field mustard	mitochondrion	35.82	36.31
CDX89976	Canola	mitochondrion	35.63	36.12
Os01t0301700-01	Rice	mitochondrion	34.48	35.71
KRH69203	Soybean	cytosol	26.44	35.48
Solyc01g100580.2.1	Tomato	mitochondrion	31.03	33.61
Os04t0320200-01	Rice	mitochondrion	33.33	33.21
AT1G02370.1	Thale cress	mitochondrion	34.1	33.15
PGSC0003DMT400007271	Potato	mitochondrion	29.89	32.3
Os07t0598500-01	Rice	mitochondrion	30.08	31.03
Os04t0544400-00	Rice	plastid	28.74	29.35
Os12t0527900-01	Rice	mitochondrion	27.97	28.4
Os04t0450200-01	Rice	cytosol	15.52	27.74
Os10t0501300-01	Rice	mitochondrion	26.63	27.1
Os02t0796400-00	Rice	mitochondrion	26.05	26.31
Os10t0501000-01	Rice	cytosol	22.41	25.94
Os10t0501200-00	Rice	mitochondrion	26.44	22.04
Os01t0280400-00	Rice	mitochondrion	22.22	18.99
Os12t0170100-01	Rice	mitochondrion	21.65	18.49
Os07t0222700-01	Rice	mitochondrion	3.07	8.08

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4325781	EMBL:AK066192	EMBL:AK073246	ProteinID:BAD87826.1
ProteinID:BAF04734.1	ProteinID:BAS71718.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlantsGene:Os01g0301000	EnsemblPlants:Os01t0301000-01	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375
PANTHER:PTHR24015	PANTHER:PTHR24015:SF504	InterPro:Pentatricopeptide_repeat	UniProt:Q5JL31	SignalP:SignalP-noTM	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00004C2ABC	RefSeq:XP_015649626.1	SEG:seg	:	:

Description

Pentatricopeptide repeat domain containing protein. (Os01t0301000-01)

Coordinates

chr1:-:11065094..11068774

Molecular Weight (calculated)

58802.1 Da

IEP (calculated)

9.264

GRAVY (calculated)

-0.401

Length

522 amino acids

Sequence
(BLAST)

001: MAPPVPTAAA RLVLRRLLST AVAEAEAAAV APAAEKAAAK GAKTAAAAGE EKDARSLYRR LSALGGAGEG SVSRVMNKWV REGREARAAD LAKYVKELRK
101: YKRHAHALEL MEWMVNTKGM NMSYTNHAIR LDLIYKVRGI EAAEQYFAGL PDPGKNHKTY GALLNCYCSA KMEDKATDIY RKMDELGISS STLPINNLMS
201: LYVKIGQHRK VTSLFEEMKV KNVKPDNLTC CLLMSSYAAL NKIDTVGEVL KEMEEKKVAL GWSAYSTLAS LYVNANMVEE AESALKKLES LIDVQAGRQP
301: FDFLMSLYAS VGNLSEVNRV WNLIKANFQK VTNTSYLGML QALYKLNDDD RMKQIYEDWE SNYENYDARL TNMMTRAHLR NGLTKEAELL WEKVKEKGAE
401: FDSKTCELFL EHYMGKGDMT SALNWVENMT KLPRKKSKLD QEKISCFLKY FEEHKDVEGA ERFLNCLRTS GCIDGKAYES LLRTYLAAGK TSRSIRQMIK
501: EDKIEICYGI GKLLKRIADK GR

Best Arabidopsis Sequence Match ( AT4G01990.1 )
(BLAST)

001: MMHSVSRLAR RFCATLATAT AEISGEAAAS VPTKAKKHRS IYKKLSSLGT RGGGKMEETL NQFVMEGVPV KKHDLIRYAK DLRKFRQPQR ALEIFEWMER
101: KEIAFTGSDH AIRLNLIAKS KGLEAAETYF NSLDDSIKNQ STYGSLLNCY CVEKEEVKAK AHFENMVDLN HVSNSLPFNN LMAMYMGLGQ PEKVPALVVA
201: MKEKSITPCD ITYSMWIQSC GSLKDLDGVE KVLDEMKAEG EGIFSWNTFA NLAAIYIKVG LYGKAEEALK SLENNMNPDV RDCYHFLINL YTGIANASEV
301: YRVWDLLKKR YPNVNNSSYL TMLRALSKLD DIDGVKKVFA EWESTCWTYD MRMANVAISS YLKQNMYEEA EAVFNGAMKK CKGQFSKARQ LLMMHLLKND
401: QADLALKHFE AAVLDQDKNW TWSSELISSF FLHFEEAKDV DGAEEFCKTL TKWSPLSSET YTLLMKTYLA AGKACPDMKK RLEEQGILVD EEQECLLSKI
501: CP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g01990, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93WC5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.