Factsheet for Bra033321.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89976	Canola	mitochondrion	97.86	97.86
CDY15237	Canola	mitochondrion	95.73	96.1
AT1G02370.1	Thale cress	mitochondrion	81.94	78.58
Bra000902.1-P	Field mustard	mitochondrion	59.81	61.48
VIT_07s0005g01630.t01	Wine grape	mitochondrion	46.02	50.21
PGSC0003DMT400023279	Potato	mitochondrion	45.83	47.68
KRH31780	Soybean	mitochondrion	42.33	45.8
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	42.52	45.15
KRH69203	Soybean	cytosol	32.62	43.19
GSMUA_Achr11P...	Banana	mitochondrion	40.78	40.46
Bra031484.1-P	Field mustard	mitochondrion	34.95	36.59
TraesCS2B01G583500.1	Wheat	mitochondrion	33.98	36.46
EES02848	Sorghum	mitochondrion	37.48	36.42
Zm00001d009122_P001	Maize	mitochondrion	36.31	36.31
Bra027131.1-P	Field mustard	mitochondrion	34.56	36.25
TraesCS2A01G552700.1	Wheat	mitochondrion	38.45	35.93
Os01t0301000-01	Rice	mitochondrion	36.31	35.82
TraesCS2B01G584000.2	Wheat	mitochondrion	38.45	35.8
TraesCS2D01G553300.1	Wheat	mitochondrion	38.84	35.71
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	34.37	35.33
TraesCS6B01G118900.1	Wheat	cytosol	28.35	35.1
TraesCS6A01G091100.1	Wheat	mitochondrion	33.79	34.32
TraesCS6A01G091000.1	Wheat	mitochondrion	33.79	34.12
TraesCS6D01G079300.1	Wheat	mitochondrion	33.59	33.99
TraesCS6B01G119100.1	Wheat	mitochondrion	32.23	33.54
Os01t0301500-01	Rice	cytosol, mitochondrion	31.26	33.26
TraesCS6D01G079200.1	Wheat	plastid	34.76	33.09
TraesCS6D01G079100.1	Wheat	mitochondrion	30.29	32.57
TraesCS2A01G552100.1	Wheat	mitochondrion	34.56	32.36
TraesCS6A01G090900.1	Wheat	mitochondrion	29.9	32.15
TraesCS2D01G553100.1	Wheat	mitochondrion	33.98	32.11
TraesCS6A01G090800.2	Wheat	mitochondrion	29.9	31.95
Os01t0301700-01	Rice	mitochondrion	31.26	31.94
TraesCS6B01G119000.1	Wheat	mitochondrion	29.71	31.94
TraesCS6A01G091200.2	Wheat	cytosol	22.52	31.78
HORVU6Hr1G016390.10	Barley	plastid	33.59	31.12
HORVU6Hr1G016360.7	Barley	mitochondrion	29.32	30.2
Bra038762.1-P	Field mustard	mitochondrion	28.54	30.12
TraesCS6D01G079400.1	Wheat	plastid	25.05	28.6
Bra033215.1-P	Field mustard	mitochondrion	28.35	28.52
Bra020588.1-P	Field mustard	mitochondrion	26.8	28.11
Bra018528.1-P	Field mustard	mitochondrion	27.38	27.43
Bra036629.1-P	Field mustard	mitochondrion	25.05	27.04
Bra036673.1-P	Field mustard	mitochondrion	24.85	26.78
Bra011054.1-P	Field mustard	mitochondrion	16.89	25.51
Bra028632.1-P	Field mustard	mitochondrion	19.61	25.0
Bra036496.1-P	Field mustard	plastid	19.81	21.03
Bra031586.1-P	Field mustard	mitochondrion	20.0	19.4
Bra032862.1-P	Field mustard	mitochondrion	13.4	18.21
Bra032863.1-P	Field mustard	mitochondrion	13.4	17.25
Bra027226.1-P	Field mustard	plastid	19.42	16.61
Bra003559.1-P	Field mustard	cytosol	22.52	16.29
Bra032865.1-P	Field mustard	cytosol	17.28	15.51
Bra001400.1-P	Field mustard	mitochondrion, plastid	21.16	14.55
Bra026128.1-P	Field mustard	cytosol	20.78	11.49
Bra032866.1-P	Field mustard	mitochondrion	13.4	10.81

Protein Annotations

EnsemblPlants:Bra033321.1	EnsemblPlants:Bra033321.1-P	EnsemblPlantsGene:Bra033321	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF504	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	UniParc:UPI0002544DBA	UniProt:M4EWY6	MapMan:35.1	:	:

Description

AT1G02370 (E=2e-234) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA10:-:4284669..4286572

Molecular Weight (calculated)

58535.5 Da

IEP (calculated)

6.889

GRAVY (calculated)

-0.387

Length

515 amino acids

Sequence
(BLAST)

001: MNFRNLIASG SRLGKRFCAT VFSPASSAGV VESSVSASPT AASRQREIYK KLSKLSVTGG TVTQTLNQFI MEGTPVRKDD LFRCAKDLRK FRRHQHALEI
101: FDWMEMRKMT LSIADHAIRL DLIAKTKGLE AAESYFNGLD PSTKSHQSTY GALMNCYCVE LKEEKAKSHF EKMDELNFVN NTLPFNNMMS MYMRLGQPEK
201: VPVLVDEMKK REISPCGITY SIWMQSCGSL NDLEGLEKVI DEMNKDSEAK TTWNTFSSLA GIYTKAGLHE KAESALRTME EKMNPNNRDA HHFLISLYAG
301: ISKASEVERV WESLKKARPE VNNISYLVML QALSKLGDID GVKRVFTEWE SKCYAYDMRL GNIAINAYLK GGMYREAEMI MEGALKKCKG PFSKSRQLLM
401: VHLLEKGEAG LAMKHLEAAA SDLVENRDDE WSWSSELVSL FFLHFEKAKD VEGAEELCRI LSKWRPLDSE TVTFLIKTYA AAEKTCPDMR ERLFREQIEV
501: SEEMQDLLET VCPQN

Best Arabidopsis Sequence Match ( AT1G02370.1 )
(BLAST)

001: MNFRNLIASG SRLGKRFCAT VFAPASATGI VEASVSSPAA ANVVEASVSS PAAENGVRTS VAAPTVASRQ RELYKKLSML SVTGGTVAET LNQFIMEGIT
101: VRKDDLFRCA KTLRKFRRPQ HAFEIFDWME KRKMTFSVSD HAICLDLIGK TKGLEAAENY FNNLDPSAKN HQSTYGALMN CYCVELEEEK AKAHFEIMDE
201: LNFVNNSLPF NNMMSMYMRL SQPEKVPVLV DAMKQRGISP CGVTYSIWMQ SCGSLNDLDG LEKIIDEMGK DSEAKTTWNT FSNLAAIYTK AGLYEKADSA
301: LKSMEEKMNP NNRDSHHFLM SLYAGISKGP EVYRVWESLK KARPEVNNLS YLVMLQAMSK LGDLDGIKKI FTEWESKCWA YDMRLANIAI NTYLKGNMYE
401: EAEKILDGAM KKSKGPFSKA RQLLMIHLLE NDKADLAMKH LEAAVSDSAE NKDEWGWSSE LVSLFFLHFE KAKDVDGAED FCKILSNWKP LDSETMTFLI
501: KTYAAAEKTS PDMRERLSQQ QIEVSEEIQD LLKTVCP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02370, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ24]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.