Factsheet for Bra038762.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98698	Canola	mitochondrion	97.13	97.13
AT4G21705.1	Thale cress	mitochondrion	83.4	82.72
KRH10858	Soybean	mitochondrion	57.17	57.41
VIT_10s0597g00040.t01	Wine grape	extracellular	58.61	56.52
Solyc02g078350.2.1	Tomato	cytosol, mitochondrion	49.8	49.49
PGSC0003DMT400076417	Potato	cytosol, mitochondrion	49.18	48.88
GSMUA_Achr1P02980_001	Banana	mitochondrion	49.59	45.66
Os07t0598500-01	Rice	mitochondrion	44.88	43.28
TraesCS1B01G188100.1	Wheat	mitochondrion	44.26	42.27
EER91421	Sorghum	mitochondrion	42.62	41.94
TraesCS1D01G166800.1	Wheat	mitochondrion	43.85	41.88
TraesCS1A01G168800.1	Wheat	mitochondrion	43.85	41.88
HORVU1Hr1G045170.4	Barley	cytosol, mitochondrion, nucleus, plastid	44.26	41.62
Zm00001d013923_P001	Maize	mitochondrion	41.19	40.2
EER90330	Sorghum	mitochondrion	40.98	39.84
EER90329	Sorghum	mitochondrion	40.57	39.36
Bra027131.1-P	Field mustard	mitochondrion	29.92	29.74
Bra031484.1-P	Field mustard	mitochondrion	29.51	29.27
Bra036673.1-P	Field mustard	mitochondrion	28.48	29.08
Bra033321.1-P	Field mustard	mitochondrion	30.12	28.54
Bra000902.1-P	Field mustard	mitochondrion	28.28	27.54
Bra020588.1-P	Field mustard	mitochondrion	27.05	26.88
Bra036629.1-P	Field mustard	mitochondrion	26.02	26.62
Bra033215.1-P	Field mustard	mitochondrion	27.66	26.37
Bra011054.1-P	Field mustard	mitochondrion	18.24	26.1
Bra028632.1-P	Field mustard	mitochondrion	21.52	25.99
Bra018528.1-P	Field mustard	mitochondrion	27.25	25.88
Bra032862.1-P	Field mustard	mitochondrion	17.42	22.43
Bra036496.1-P	Field mustard	plastid	20.7	20.82
Bra032863.1-P	Field mustard	mitochondrion	17.01	20.75
Bra032865.1-P	Field mustard	cytosol	22.54	19.16
Bra001400.1-P	Field mustard	mitochondrion, plastid	27.46	17.89
Bra031586.1-P	Field mustard	mitochondrion	19.26	17.7
Bra027226.1-P	Field mustard	plastid	21.52	17.44
Bra003559.1-P	Field mustard	cytosol	23.77	16.29
Bra032866.1-P	Field mustard	mitochondrion	19.47	14.89
Bra026128.1-P	Field mustard	cytosol	23.57	12.35

Protein Annotations

EnsemblPlants:Bra038762.1	EnsemblPlants:Bra038762.1-P	EnsemblPlantsGene:Bra038762	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF1638	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452
TIGRFAMs:TIGR00756	UniParc:UPI0002540CA4	UniProt:M4FCE3	MapMan:35.1	:	:

Description

AT4G21705 (E=1e-235) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA03:-:24218736..24220267

Molecular Weight (calculated)

55616.6 Da

IEP (calculated)

7.178

GRAVY (calculated)

-0.427

Length

488 amino acids

Sequence
(BLAST)

001: MNILRRIPAN LFTSRYYYTN RVKKTTLYSK ISPLGNPKSS VYPELQNWVH SGNKVSVAEL IRIVHDLRRR KRFLHALEVS KWMNETGVCI FSPTEHAVHL
101: DLVGRVHGFV SAEAYFESLK EHHKNDKTHG ALLNCYVRQQ DVEKSLLHFE KMKELGYASS SLTYNNIMCL YTNLGQHEKV PRVLDEMKEE NVAPDNYSYR
201: LCINAFGVMN DLEGIGEILR DMETVDWNTY AVAAKFYIDG GDRGKAVELL RMSEDRLESK DGEGYNHLIT LYSKLGDKGE VLRLWELEKD ACKRRINQDY
301: LTVLQSLVKI DALKEAEEVV KEWEASSGNC YDFRVPSVVI RGYVGRGMEE RAEAMLEDLG RRGKGTTPDS WGLVAAAYVE KGVLDNAYKC LKTALDVEVG
401: KRKWRPGVKV VTSVLSWVGD EGSLREVESF VASLRNCMGV NREMYHALVK ADIREGGSSV DTLLQRMKED KIETNEETMA ILSTRSHC

Best Arabidopsis Sequence Match ( AT4G21705.1 )
(BLAST)

001: MNILRRIPAN LIASRYYYTN RVKKTTLYSK ISPLGDPKSS VYPELQNWVQ CGKKVSVAEL IRIVHDLRRR KRFLHALEVS KWMNETGVCV FSPTEHAVHL
101: DLIGRVYGFV TAEEYFENLK EQYKNDKTYG ALLNCYVRQQ NVEKSLLHFE KMKEMGFVTS SLTYNNIMCL YTNIGQHEKV PKVLEEMKEE NVAPDNYSYR
201: ICINAFGAMY DLERIGGTLR DMERRQDITM DWNTYAVAAK FYIDGGDCDR AVELLKMSEN RLEKKDGEGY NHLITLYARL GKKIEVLRLW DLEKDVCKRR
301: INQDYLTVLQ SLVKIDALVE AEEVLTEWKS SGNCYDFRVP NTVIRGYIGK SMEEKAEAML EDLARRGKAT TPESWELVAT AYAEKGTLEN AFKCMKTALG
401: VEVGSRKWRP GLTLVTSVLS WVGDEGSLKE VESFVASLRN CIGVNKQMYH ALVKADIREG GRNIDTLLQR MKDDKIEIDE ETTVILSTRS PC

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.