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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57695 Canola mitochondrion 81.32 96.02
AT1G80270.2 Thale cress mitochondrion 69.94 83.56
KRH66764 Soybean cytosol 33.43 57.35
KRH69049 Soybean mitochondrion 45.65 53.37
VIT_08s0007g05090.t01 Wine grape mitochondrion 46.77 53.37
GSMUA_Achr5P27560_001 Banana cytosol 37.64 52.24
KRH31614 Soybean mitochondrion 43.4 51.5
GSMUA_Achr8P21680_001 Banana mitochondrion 44.52 51.29
PGSC0003DMT400022632 Potato mitochondrion 44.66 50.96
Solyc12g020050.1.1 Tomato plastid 44.38 50.64
KRG95098 Soybean mitochondrion 43.12 50.33
TraesCS3D01G195000.1 Wheat mitochondrion 39.75 46.17
TraesCS3B01G220600.2 Wheat mitochondrion 39.61 46.0
HORVU3Hr1G040710.1 Barley mitochondrion 39.47 45.91
TraesCS3A01G191200.1 Wheat mitochondrion 39.19 45.59
PGSC0003DMT400021596 Potato mitochondrion 39.19 45.51
OQU86720 Sorghum mitochondrion 38.9 45.19
GSMUA_Achr11P... Banana mitochondrion 39.75 45.06
Zm00001d008224_P002 Maize mitochondrion 39.33 45.02
Zm00001d040475_P001 Maize mitochondrion 37.78 43.88
Os12t0170100-01 Rice mitochondrion 37.64 43.86
Os01t0280400-00 Rice mitochondrion 37.22 43.37
Bra027226.1-P Field mustard plastid 35.81 42.36
Bra026128.1-P Field mustard cytosol 54.78 41.89
Bra036673.1-P Field mustard mitochondrion 16.71 24.9
Bra031484.1-P Field mustard mitochondrion 16.85 24.39
Bra027131.1-P Field mustard mitochondrion 16.57 24.03
Bra038762.1-P Field mustard mitochondrion 16.29 23.77
Bra018528.1-P Field mustard mitochondrion 17.13 23.74
Bra000902.1-P Field mustard mitochondrion 16.57 23.55
Bra036629.1-P Field mustard mitochondrion 15.59 23.27
Bra020588.1-P Field mustard mitochondrion 16.01 23.22
Bra033321.1-P Field mustard mitochondrion 16.29 22.52
Bra011054.1-P Field mustard mitochondrion 10.67 22.29
Bra031586.1-P Field mustard mitochondrion 16.57 22.22
Bra028632.1-P Field mustard mitochondrion 11.8 20.79
Bra033215.1-P Field mustard mitochondrion 14.33 19.92
Bra036496.1-P Field mustard plastid 12.36 18.14
Bra032862.1-P Field mustard mitochondrion 9.41 17.68
Bra032863.1-P Field mustard mitochondrion 9.69 17.25
Bra032865.1-P Field mustard cytosol 10.81 13.41
Bra001400.1-P Field mustard mitochondrion, plastid 13.48 12.82
Bra032866.1-P Field mustard mitochondrion 8.71 9.72
Protein Annotations
Gene3D:1.25.40.10MapMan:16.12.5.4.19EnsemblPlantsGene:Bra003559EnsemblPlants:Bra003559.1EnsemblPlants:Bra003559.1-Pncoils:Coil
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0009536GO:GO:0009941InterPro:IPR002885InterPro:IPR011990
UniProt:M4CH76PFAM:PF01535PFAM:PF13812PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF26
InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI00025412F6SEG:seg:
Description
AT1G80270 (E=4e-257) | DNA-binding protein, putative
Coordinates
chrA07:+:13778650..13785715
Molecular Weight (calculated)
80632.3 Da
IEP (calculated)
8.126
GRAVY (calculated)
-0.570
Length
712 amino acids
Sequence
(BLAST)
001: MSESTNQRQT GELLSTLWIS GAIVGVIRPS GSEDDKTMGF TQTKPRASSA TRQTSPTVTT SVKEKGKAAK DLFRGQNRHS RKERKTLNPC HFINIQHTTL
101: CSHFFFFVDS NFTRLSQRLR LGACCTTALY SKQEIPSGER SFFTLQSHSI LHDTLPRVYN MSSSMSNRLL SSTAGTKSDQ EEDDDLEDGF SELENSKSGQ
201: ESSTSSSSDD SDVDEGKLSA DEEEELELDL TETDDSKKTL EKKQSELFKA IVSAGGLSVG SALDKWVEEE GNEITRTEVA KAMLQLRRRR MYGRALQMSE
301: WLEANKKIEM NERDYASRLD LIVKTRGLEK GEAYVDKIPK SFRGEVMYRT LLANCVVACN VKKSELVFNR MKDLGFPRSG FTCDQMLLLY KRVDRKKIAD
401: VLLLMEKENV KPSLLTYKIL IDVKGSSNDI KGMEQVVETM KDEGVEPDFN TQAIIARHYS VAGLKEKAES VLKEMEGESL EANRRAFKDL LSIYASLGRE
501: DEVRRVWKIC EPKPRFEESL SAIQAFGKLN KVQEAEEVFE KVIKMDRRVS SNTFSVLLRV YVDHKMLSKG KDLVKRMAES GCRIEASTWD ALIRLYVEAG
601: EVEKADSLLS KASKQSHTKL MMSSFMYIMD EYAKRGDVHN TEKIFQKMRE VGYTSRLRQF QALMQGYLNA KAPAYGMRDR MKADNIFPNK AMAAQLAQGD
701: PFKKTTISDI LD
Best Arabidopsis Sequence Match ( AT1G80270.4 )
(BLAST)
001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
Arabidopsis Description
PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.