Factsheet for Bra031586.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06272	Canola	mitochondrion	98.12	98.3
AT1G07590.1	Thale cress	mitochondrion	88.14	87.64
PGSC0003DMT400069375	Potato	cytosol	57.82	64.77
KRH10262	Soybean	mitochondrion	61.39	64.3
KRH23068	Soybean	mitochondrion	60.64	63.51
VIT_06s0004g04690.t01	Wine grape	mitochondrion	62.9	63.5
Solyc06g071900.2.1	Tomato	mitochondrion	60.26	59.81
Zm00001d024521_P001	Maize	mitochondrion	52.35	54.09
GSMUA_Achr9P23230_001	Banana	mitochondrion	52.54	53.45
TraesCS7D01G293300.1	Wheat	mitochondrion	51.41	53.22
TraesCS7A01G296400.1	Wheat	mitochondrion	51.04	52.83
TraesCS7B01G189100.1	Wheat	mitochondrion	50.85	52.63
HORVU7Hr1G066420.6	Barley	plastid	47.83	48.29
OQU79953	Sorghum	cytosol	51.98	44.16
Bra027131.1-P	Field mustard	mitochondrion	21.66	23.42
Bra031484.1-P	Field mustard	mitochondrion	21.66	23.37
Bra036629.1-P	Field mustard	mitochondrion	19.59	21.8
Bra020588.1-P	Field mustard	mitochondrion	20.15	21.79
Bra000902.1-P	Field mustard	mitochondrion	19.96	21.16
Bra036673.1-P	Field mustard	mitochondrion	19.02	21.13
Bra033215.1-P	Field mustard	mitochondrion	19.96	20.7
Bra018528.1-P	Field mustard	mitochondrion	19.96	20.62
Bra033321.1-P	Field mustard	mitochondrion	19.4	20.0
Bra028632.1-P	Field mustard	mitochondrion	14.88	19.55
Bra011054.1-P	Field mustard	mitochondrion	12.43	19.35
Bra038762.1-P	Field mustard	mitochondrion	17.7	19.26
Bra027226.1-P	Field mustard	plastid	20.72	18.27
Bra003559.1-P	Field mustard	cytosol	22.22	16.57
Bra036496.1-P	Field mustard	plastid	14.31	15.67
Bra032862.1-P	Field mustard	mitochondrion	10.73	15.04
Bra032863.1-P	Field mustard	mitochondrion	11.3	15.0
Bra032865.1-P	Field mustard	cytosol	14.12	13.07
Bra026128.1-P	Field mustard	cytosol	21.66	12.35
Bra001400.1-P	Field mustard	mitochondrion, plastid	16.76	11.88
Bra032866.1-P	Field mustard	mitochondrion	11.86	9.87

Protein Annotations

EnsemblPlants:Bra031586.1	EnsemblPlants:Bra031586.1-P	EnsemblPlantsGene:Bra031586	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0046686	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat
InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF588	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375
SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI00025433D7	UniProt:M4ES08	MapMan:35.1	:

Description

AT1G07590 (E=2e-257) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA09:+:35691031..35693063

Molecular Weight (calculated)

60226.0 Da

IEP (calculated)

9.450

GRAVY (calculated)

-0.311

Length

531 amino acids

Sequence
(BLAST)

001: MRSIIALVRQ RDCFVQAIRR TPGVSYSPAS DHQPNFKASN FLTTLISSTK SSESDGDEEE PNKCLSLRIE KLPKGVTVGS ALQSWMGDGF PVHGGDVYHA
101: INRLRKLGRN KRALELMEWI IRERPYRPGE LEYSYLLEFT VKIHGISQGE TLFTRVPQEF QNELLYNNLV IACLDQGVMR LALGYMKKMR ELGHRTSHLV
201: YNRLIIRNSA PGRRKLIAKD LALMKADKAV PHVSTYHILM KLEANEHNVD GVLKAFEGMK KAGVEANEVS YCILAMAHAV ARLYTVAEAY TEEIERTITG
301: DNWSTLDVLM ILYGRLGKEK EVERAWNVVK GFHHVRSKSY LLATEAFGRV GNLERAEEVW LEMKSVRGVK ETEQFNSLMS VYCKRGLIEK AISVFREMTG
401: DGCKPNSITY RHLALGCAKA NLMKEAIKNI EMGSSLKTSK SVRSSTPWLE TTLAIVECFA EKGDVENSEK LFEELNSAKY NRYAFVYNAL FKAYVKGRVY
501: DPNLFKRMVL GGARPDAESY SLLKLVEQYK P

Best Arabidopsis Sequence Match ( AT1G07590.1 )
(BLAST)

001: MRSIIALMRQ REYFVQAIRR TTCVASPALN QTNFQASSFL TTLISSKKSP EETCIGSEEE EEEPNKCLSL RIEKLPKGVT VGSALQSWMG DGFPVHGGDV
101: YHAINRLRKL GRNKRALELM EWIIRERPYR LGELEYSYLL EFTVKLHGVS QGEKLFTRVP QEFQNELLYN NLVIACLDQG VIRLALEYMK KMRELGYRTS
201: HLVYNRLIIR NSAPGRRKLI AKDLALMKAD KATPHVSTYH ILMKLEANEH NIDGVLKAFD GMKKAGVEPN EVSYCILAMA HAVARLYTVA EAYTEEIEKS
301: ITGDNWSTLD ILMILYGRLG KEKELARTWN VIRGFHHVRS KSYLLATEAF ARVGNLDRAE ELWLEMKNVK GLKETEQFNS LLSVYCKDGL IEKAIGVFRE
401: MTGNGFKPNS ITYRHLALGC AKAKLMKEAL KNIEMGLNLK TSKSIGSSTP WLETTLSIIE CFAEKGDVEN SEKLFEEVKN AKYNRYAFVY NALFKAYVKA
501: KVYDPNLFKR MVLGGARPDA ESYSLLKLVE QYKP

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q940Q2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.