Factsheet for TraesCS2B01G583500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G553100.1	Wheat	mitochondrion	90.21	79.45
TraesCS2A01G552100.1	Wheat	mitochondrion	89.38	78.0
TraesCS6B01G118900.1	Wheat	cytosol	50.21	57.93
Os01t0301700-01	Rice	mitochondrion	57.71	54.96
TraesCS6B01G119000.1	Wheat	mitochondrion	53.96	54.07
TraesCS6B01G119100.1	Wheat	mitochondrion	54.17	52.53
VIT_07s0005g01630.t01	Wine grape	mitochondrion	36.67	37.29
TraesCS2B01G584000.2	Wheat	mitochondrion	40.0	34.72
PGSC0003DMT400023279	Potato	mitochondrion	35.42	34.34
Bra033321.1-P	Field mustard	mitochondrion	36.46	33.98
CDX89976	Canola	mitochondrion	36.25	33.79
CDY15237	Canola	mitochondrion	36.04	33.72
AT4G01990.1	Thale cress	mitochondrion	34.79	33.27
VIT_14s0060g01120.t01	Wine grape	cytosol, mitochondrion	34.38	33.13
Solyc01g100580.2.1	Tomato	mitochondrion	32.71	32.57
KRH69203	Soybean	cytosol	26.25	32.39
CDX91822	Canola	mitochondrion	33.33	32.0
Solyc01g079320.2.1	Tomato	cytosol, mitochondrion	32.29	31.96
KRH31780	Soybean	mitochondrion	31.67	31.93
PGSC0003DMT400007271	Potato	mitochondrion	32.08	31.88
Bra000902.1-P	Field mustard	mitochondrion	33.12	31.74
CDX90962	Canola	mitochondrion	33.12	31.74
TraesCS1B01G188100.1	Wheat	mitochondrion	32.29	30.33
AT1G02370.1	Thale cress	mitochondrion	33.54	29.98
TraesCS1B01G188200.1	Wheat	mitochondrion	28.33	27.64
TraesCS2B01G410100.1	Wheat	plastid	27.92	26.38
TraesCS5B01G104900.1	Wheat	mitochondrion	27.29	25.69
TraesCS6B01G391300.1	Wheat	mitochondrion	24.79	23.06
TraesCS2B01G336200.1	Wheat	mitochondrion	19.79	22.67
TraesCS3B01G220600.2	Wheat	mitochondrion	20.83	16.31
TraesCS7B01G189100.1	Wheat	mitochondrion	15.83	14.81

Protein Annotations

EnsemblPlants:TraesCS2B01G583500.1	EnsemblPlantsGene:TraesCS2B01G583500	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF942
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:770756417..770760519

Molecular Weight (calculated)

54974.4 Da

IEP (calculated)

8.386

GRAVY (calculated)

-0.351

Length

480 amino acids

Sequence
(BLAST)

001: MLRTAATAAL RRVSPPASQV PAGFVHAECR QGPILRAAWL PLYRRLSKLP PAACVAPELD RWLRERQPLS QHQLLSYVRK LRNFRHHRHA LXLIDWMEAR
101: GACLLTGDHA LRLDLVCKMN GLEAAEEYFS SLPDMHKSVK TYSSLLNCYA EHKPEKGLEL YEKMRTMNIV PSTLVYQNLM SLYLKAGQPE KVLRTFEEMR
201: GNGIRTDNFT YCILTEGHIM LNGPESTEKF LEDFEKSIPV HWSMYTVLAN NYNKVGQFDK AELALKKAEE VMDKGEMFAW HNLLSLYASS GNLSEVKRLW
301: VSLKLALRIC SNRSYLVMLS SLKKLDDFDS MQQVFREWEL TQQSFDMRIP NVMIQAYLAK DMTDEAEALR QAAMAQGRSN PVTFYIFAES YLEKSRIEAA
401: LQVWRDAEKI VNTPNWAPRP ELVKRFLKHF EEAKDVDGME SFCSCLEKLE CLDADARDAL SRTYVAAGRT NPSINGRRPG

Best Arabidopsis Sequence Match ( AT1G02150.1 )
(BLAST)

001: MLLQAAVQNR NVPLASSASY SRLLRCRSPV VSVAALSKKT AAIVCSISQV YGYGTVDYER RPIVQWNAIY KKISLMEKPE LGAASVLNQW EKAGRKLTKW
101: ELCRVVKELR KYKRANQALE VYDWMNNRGE RFRLSASDAA IQLDLIGKVR GIPDAEEFFL QLPENFKDRR VYGSLLNAYV RAKSREKAEA LLNTMRDKGY
201: ALHPLPFNVM MTLYMNLREY DKVDAMVFEM KQKDIRLDIY SYNIWLSSCG SLGSVEKMEL VYQQMKSDVS IYPNWTTFST MATMYIKMGE TEKAEDALRK
301: VEARITGRNR IPYHYLLSLY GSLGNKKELY RVWHVYKSVV PSIPNLGYHA LVSSLVRMGD IEGAEKVYEE WLPVKSSYDP RIPNLLMNAY VKNDQLETAE
401: GLFDHMVEMG GKPSSSTWEI LAVGHTRKRC ISEALTCLRN AFSAEGSSNW RPKVLMLSGF FKLCEEESDV TSKEAVLELL RQSGDLEDKS YLALIDVDEN
501: RTVNNSEIDA HETDALLTQL QDDL

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g02150 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.