Factsheet for HORVU7Hr1G011310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G061300.1	Wheat	cytosol, mitochondrion, nucleus, plastid	94.92	97.39
TraesCS7D01G056000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	94.56	97.02
TraesCS4A01G428500.1	Wheat	mitochondrion	94.19	96.29
Os04t0320200-01	Rice	mitochondrion	82.03	86.26
EER87766	Sorghum	cytosol	81.13	83.4
Zm00001d045492_P004	Maize	cytosol	81.67	75.5
GSMUA_Achr1P16170_001	Banana	cytosol	63.16	71.46
CDY24553	Canola	mitochondrion	33.94	64.93
VIT_00s0394g00020.t01	Wine grape	cytosol	55.17	62.17
KRH45616	Soybean	nucleus	54.81	61.63
CDY50357	Canola	mitochondrion	22.32	61.5
AT1G60770.1	Thale cress	cytosol	53.72	60.29
CDX96239	Canola	mitochondrion	53.72	60.29
CDY46999	Canola	mitochondrion	53.72	60.29
Bra027131.1-P	Field mustard	mitochondrion	53.18	59.67
Solyc11g006380.1.1	Tomato	cytosol	52.99	59.35
CDY34141	Canola	mitochondrion	52.81	59.15
Bra031484.1-P	Field mustard	mitochondrion	52.63	58.94
PGSC0003DMT400002590	Potato	cytosol	52.27	58.54
KRG99413	Soybean	cytosol, mitochondrion	35.03	54.99
CDY50358	Canola	cytosol	22.32	52.34
CDY24554	Canola	cytosol	13.61	49.02
HORVU2Hr1G120330.4	Barley	endoplasmic reticulum, extracellular	29.76	32.73
HORVU6Hr1G016360.7	Barley	mitochondrion	28.68	31.6
HORVU6Hr1G016390.10	Barley	plastid	30.49	30.22
HORVU2Hr1G093220.7	Barley	mitochondrion	28.31	29.77
HORVU1Hr1G045170.4	Barley	cytosol, mitochondrion, nucleus, plastid	27.04	28.71
HORVU3Hr1G070650.1	Barley	cytosol	7.26	27.59
HORVU5Hr1G027150.1	Barley	mitochondrion	25.59	27.43
HORVU6Hr1G085430.2	Barley	mitochondrion	25.05	26.09
HORVU1Hr1G085940.2	Barley	cytosol	7.8	25.29
HORVU2Hr1G079080.2	Barley	cytosol	11.07	22.18
HORVU3Hr1G040710.1	Barley	mitochondrion	22.32	20.1
HORVU7Hr1G066420.6	Barley	plastid	17.24	18.06

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A287VI88	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
EnsemblPlantsGene:HORVU7Hr1G011310	EnsemblPlants:HORVU7Hr1G011310.1	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF494	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B461C02	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:15924908..15928796

Molecular Weight (calculated)

63010.0 Da

IEP (calculated)

9.624

GRAVY (calculated)

-0.557

Length

551 amino acids

Sequence
(BLAST)

001: KTLKTPGERR GQAAAAMATR AKDLARRSPK KYVEEALYRR LFRRGSTPQA VREEVDGFLG SRKRAFKWEV GVCVRRLRRQ ELYRPALKLT EVMTRRGMNP
101: TVGDQAIRLD LVAKSRGIAA AEKYFMDLPE TSKTHMTYGA LLNCYCKELM TEKAESLMEK MKELNFAFTA MSYNSLMTLY TKVNQPEKVP SIIQDMKADD
201: VLPDVYTYNV WMRSLAARQD IPGVERVVEE MTRDGRVAPD WTTYSNLASI YVDAGLFEKA EAALKELEKR NTGNDLEAYQ FLITLYGRTQ NLVEVHRVWR
301: SLKRNNPRKA NMSYLNMIQV LANLKDLPAA EACFKEWEAR YIRPPKTKAT DAVTTETSKL DEETSTEVSN NDLDVKETED TGTEELDLKR PKYDIRVANA
401: LMKAYVTEGM LDKAIALKKR AKMRGGRLNA KTWEIFMEHY LKVGDLKNAH WCADRAIKKG HSSGRIWVPP HDVTETLMGY FEKKKDVDGA ESFVEVLKKV
501: QKDLGTVVFE PLVRTYAAAG KKFPGMRHRL KIENVELSEE TDKLVDSICV D

Best Arabidopsis Sequence Match ( AT1G60770.1 )
(BLAST)

001: MAMRHLSRSR DVTKRSTKKY IEEPLYNRLF KDGGTEVKVR QQLNQFLKGT KHVFKWEVGD TIKKLRNRGL YYPALKLSEV MEERGMNKTV SDQAIHLDLV
101: AKAREITAGE NYFVDLPETS KTELTYGSLL NCYCKELLTE KAEGLLNKMK ELNITPSSMS YNSLMTLYTK TGETEKVPAM IQELKAENVM PDSYTYNVWM
201: RALAATNDIS GVERVIEEMN RDGRVAPDWT TYSNMASIYV DAGLSQKAEK ALQELEMKNT QRDFTAYQFL ITLYGRLGKL TEVYRIWRSL RLAIPKTSNV
301: AYLNMIQVLV KLNDLPGAET LFKEWQANCS TYDIRIVNVL IGAYAQEGLI QKANELKEKA PRRGGKLNAK TWEIFMDYYV KSGDMARALE CMSKAVSIGK
401: GDGGKWLPSP ETVRALMSYF EQKKDVNGAE NLLEILKNGT DNIGAEIFEP LIRTYAAAGK SHPAMRRRLK MENVEVNEAT KKLLDEVSQD V

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g60770 [Source:UniProtKB/Swiss-Prot;Acc:O22714]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.