Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88705 | Sorghum | plastid | 47.54 | 77.39 |
| Os07t0222700-01 | Rice | mitochondrion | 7.14 | 37.37 |
| Zm00001d040475_P001 | Maize | mitochondrion | 20.15 | 34.09 |
| Zm00001d008224_P002 | Maize | mitochondrion | 19.86 | 33.12 |
| Zm00001d002789_P001 | Maize | plastid | 10.99 | 22.22 |
| Zm00001d013923_P001 | Maize | mitochondrion | 10.7 | 22.2 |
| Zm00001d023915_P001 | Maize | mitochondrion | 10.32 | 21.36 |
| Zm00001d024521_P001 | Maize | mitochondrion | 10.51 | 21.21 |
| Zm00001d009122_P001 | Maize | mitochondrion | 10.03 | 20.19 |
| Zm00001d052030_P001 | Maize | plastid | 9.74 | 19.24 |
| Zm00001d045492_P004 | Maize | cytosol | 10.9 | 18.96 |
| Zm00001d003500_P001 | Maize | mitochondrion | 7.62 | 18.68 |
| Zm00001d032543_P001 | Maize | mitochondrion | 9.26 | 18.57 |
| Zm00001d011182_P001 | Maize | endoplasmic reticulum | 7.04 | 14.84 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103632127 | MapMan:16.12.5.4.19 | Gene3D:3.60.10.10 | UniProt:A0A1D6HW24 | ncoils:Coil |
| InterPro:Endo/exonu/phosph_ase_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002885 | InterPro:IPR011990 |
| InterPro:IPR036691 | ProteinID:ONM52433.1 | PFAM:PF01535 | PFAM:PF13812 | PFscan:PS51375 | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF26 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00084443F9 | EnsemblPlantsGene:Zm00001d019185 |
| EnsemblPlants:Zm00001d019185_P001 | EnsemblPlants:Zm00001d019185_T001 | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein mitochondrial
Coordinates
chr7:+:20695401..20704885
Molecular Weight (calculated)
118812.0 Da
IEP (calculated)
9.216
GRAVY (calculated)
-0.430
Length
1037 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLMWYFKPCL YMDVGLASAV TALRTCTDVA HLAHVLEQFR LARCGKLVRD ARAVAPSRAS ASTSSSLGVE LELSMHAGGP GSRISNIWLL FRLKTVSVRL
0101: SRDDSLRPCQ ALLSRYSETV VPLIRRFCST PIKVEEVANI EADGKVSYLD AAALPCDNSD CRGEPSHGSR PWTKRLKHYG PSQKGNRNHH ETKLPGSGRD
0201: GSSRKGSHPQ KGKTKLPGSG RDGSSRKGSH HETKLADRDE LIQKGSHHEK ELADTPFKPF LFQIVLDTSM SSLMPVLDGW VKIGNRLERD KVNMVLFHLR
0301: KQRMYNKALK FVEWIERRKL LNFEERDYAS HLDLIARNYG VEAAQKYIER VPEAFRSEVL YETLLVNCVC RDDAQKAEQV FNEIRELSLP LTISACNQML
0401: LLYKRVSRNK VVDILTLMEK ENIKYSIFTY KLMIDLKVRS NDILGMEQVL NSMKENGLEP NFTIQTMVAK FYISGCFTEK AEEVINAMEV HVKANRHAVR
0501: SLLDLYAILG RPVDVERVWN LCAEPKLEDF LAAIKAWSKL GHIERAEEIF DVLVKTFPKL TSKYFNAMLE VYAENKLLDK SKKFIERMCL DGCTIGPLTW
0601: DAVVKLYVNL GELSKADSFL MNVTEDNPDR HPLFSSYVIL LKAYAEKGDI HNAEKIFDRV KQTNFPARTL PYNLLLAAYA SAQVTPYGFR ERMKADKFSP
0701: GKSQIEQLKQ LDSFAYALQV GLNENSKGEF WEGLEDMVSS VPVGKKLFIG DLNNHVGTSS TSFDGVYGGF GFGTRNQEKE ILNFALAYDM FIANTFFRKR
0801: KSHLVTFSSG QHTSQIDFVL LRKEDRHVCL DCKVIPGECV ICLQRNKHNK LTRIKWWKLK RDVAQTFKER VIEEGHWAEE RDTNVMWRKM ATCIRKIASE
0901: EFGLSQGNRR EVKDTWWWNE DVQKAIKEKK DCYKHLHHDK CANNIEKYRI AKKSAKRANE EIKNKWKEYF NKLFNGGNES STIELDEPFD DNNMGFVRRI
1001: QEYEVKEALK RMKVGRAMGP DGIPIEVWRC LGDIAIV
0101: SRDDSLRPCQ ALLSRYSETV VPLIRRFCST PIKVEEVANI EADGKVSYLD AAALPCDNSD CRGEPSHGSR PWTKRLKHYG PSQKGNRNHH ETKLPGSGRD
0201: GSSRKGSHPQ KGKTKLPGSG RDGSSRKGSH HETKLADRDE LIQKGSHHEK ELADTPFKPF LFQIVLDTSM SSLMPVLDGW VKIGNRLERD KVNMVLFHLR
0301: KQRMYNKALK FVEWIERRKL LNFEERDYAS HLDLIARNYG VEAAQKYIER VPEAFRSEVL YETLLVNCVC RDDAQKAEQV FNEIRELSLP LTISACNQML
0401: LLYKRVSRNK VVDILTLMEK ENIKYSIFTY KLMIDLKVRS NDILGMEQVL NSMKENGLEP NFTIQTMVAK FYISGCFTEK AEEVINAMEV HVKANRHAVR
0501: SLLDLYAILG RPVDVERVWN LCAEPKLEDF LAAIKAWSKL GHIERAEEIF DVLVKTFPKL TSKYFNAMLE VYAENKLLDK SKKFIERMCL DGCTIGPLTW
0601: DAVVKLYVNL GELSKADSFL MNVTEDNPDR HPLFSSYVIL LKAYAEKGDI HNAEKIFDRV KQTNFPARTL PYNLLLAAYA SAQVTPYGFR ERMKADKFSP
0701: GKSQIEQLKQ LDSFAYALQV GLNENSKGEF WEGLEDMVSS VPVGKKLFIG DLNNHVGTSS TSFDGVYGGF GFGTRNQEKE ILNFALAYDM FIANTFFRKR
0801: KSHLVTFSSG QHTSQIDFVL LRKEDRHVCL DCKVIPGECV ICLQRNKHNK LTRIKWWKLK RDVAQTFKER VIEEGHWAEE RDTNVMWRKM ATCIRKIASE
0901: EFGLSQGNRR EVKDTWWWNE DVQKAIKEKK DCYKHLHHDK CANNIEKYRI AKKSAKRANE EIKNKWKEYF NKLFNGGNES STIELDEPFD DNNMGFVRRI
1001: QEYEVKEALK RMKVGRAMGP DGIPIEVWRC LGDIAIV
001: MFALSKVLRR TQRLRLGACS AVFSKDIQLG GERSFDSNSI ASTKREAVPR FYEISSLSNR ALSSSAGTKS DQEEDDLEDG FSELEGSKSG QGSTSSDEDE
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
101: GKLSADEEEE EELDLIETDV SRKTVEKKQS ELFKTIVSAP GLSIGSALDK WVEEGNEITR VEIAKAMLQL RRRRMYGRAL QMSEWLEANK KIEMTERDYA
201: SRLDLTVKIR GLEKGEACMQ KIPKSFKGEV LYRTLLANCV AAGNVKKSEL VFNKMKDLGF PLSGFTCDQM LLLHKRIDRK KIADVLLLME KENIKPSLLT
301: YKILIDVKGA TNDISGMEQI LETMKDEGVE LDFQTQALTA RHYSGAGLKD KAEKVLKEME GESLEANRRA FKDLLSIYAS LGREDEVKRI WKICESKPYF
401: EESLAAIQAF GKLNKVQEAE AIFEKIVKMD RRASSSTYSV LLRVYVDHKM LSKGKDLVKR MAESGCRIEA TTWDALIKLY VEAGEVEKAD SLLDKASKQS
501: HTKLMMNSFM YIMDEYSKRG DVHNTEKIFL KMREAGYTSR LRQFQALMQA YINAKSPAYG MRDRLKADNI FPNKSMAAQL AQGDPFKKTA ISDILD
Arabidopsis Description
PPR596PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.