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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G341400.1 Wheat mitochondrion 96.91 96.35
TraesCS6B01G391300.1 Wheat mitochondrion 94.78 94.96
HORVU6Hr1G085430.2 Barley mitochondrion 94.2 92.06
Os02t0796400-00 Rice mitochondrion 74.27 74.27
EES07683 Sorghum mitochondrion 73.5 72.11
Zm00001d052030_P001 Maize plastid 70.6 69.52
Zm00001d011182_P001 Maize endoplasmic reticulum 50.1 52.64
GSMUA_Achr7P12830_001 Banana mitochondrion 52.42 49.82
VIT_18s0001g07000.t01 Wine grape mitochondrion 47.0 48.41
KRH52991 Soybean mitochondrion 43.91 45.77
CDY25035 Canola mitochondrion, plastid 42.36 44.69
CDY19721 Canola mitochondrion 41.2 44.65
Bra036629.1-P Field mustard mitochondrion 41.01 44.44
CDX99984 Canola mitochondrion 41.01 44.35
Bra020588.1-P Field mustard mitochondrion 41.97 44.2
AT5G27460.1 Thale cress cytosol, mitochondrion, plastid 41.59 43.79
PGSC0003DMT400004477 Potato plastid 40.23 43.24
CDY05574 Canola mitochondrion 42.55 41.98
Solyc01g081320.2.1 Tomato plastid 41.97 41.89
KRH62276 Soybean mitochondrion 44.29 39.83
TraesCS5A01G099700.1 Wheat mitochondrion 30.95 31.37
TraesCS2A01G391600.1 Wheat plastid 25.92 26.64
TraesCS2A01G318100.1 Wheat mitochondrion 21.28 26.25
TraesCS1A01G168800.1 Wheat mitochondrion 25.92 26.22
TraesCS7A01G061300.1 Wheat cytosol, mitochondrion, nucleus, plastid 25.92 24.95
TraesCS4A01G428500.1 Wheat mitochondrion 25.92 24.86
TraesCS1A01G168700.1 Wheat mitochondrion 27.66 24.49
TraesCS2A01G552700.1 Wheat mitochondrion 25.73 24.14
TraesCS6A01G091100.1 Wheat mitochondrion 23.6 24.06
TraesCS6A01G090900.1 Wheat mitochondrion 22.05 23.8
TraesCS6A01G091200.2 Wheat cytosol 16.63 23.56
TraesCS6A01G091000.1 Wheat mitochondrion 23.02 23.33
TraesCS6A01G090800.2 Wheat mitochondrion 21.28 22.82
TraesCS2A01G552100.1 Wheat mitochondrion 23.4 22.0
TraesCS7A01G296400.1 Wheat mitochondrion 20.5 20.66
TraesCS3A01G191200.1 Wheat mitochondrion 23.6 19.93
Protein Annotations
EnsemblPlants:TraesCS6A01G358600.1EnsemblPlantsGene:TraesCS6A01G358600Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF578
PFAM:PF01535PFAM:PF13812PFscan:PS51375SEG:segSUPFAM:SSF48452TIGRFAMs:TIGR00756
MapMan:35.1:::::
Description
No Description!
Coordinates
chr6A:+:588566549..588568590
Molecular Weight (calculated)
58092.1 Da
IEP (calculated)
8.922
GRAVY (calculated)
-0.196
Length
517 amino acids
Sequence
(BLAST)
001: MAMAAAVARR LLRLLSSRSN PKPASLSSCS SSSSFDTPAT AGEREGDPLS WRLLRLRSPG AAAAAIDGWA QERGRVWRPD LQRAVSQLRR ARRYGHALEI
101: LSWMDSRKEI KLLPLDHAAR LDLIAKVHGT SQAEEYYNKL TNSASREAAS FPLLHCYVAD RNVQKAESFM ASLQSIGLPV DPHSFNEMMK LYVATCQYEK
201: VFSVIDLMKR NNIPRNALSY NLWMNACSVS DVSSVQSVFK EMDNDGTIEV GWSTYCTLAN IFKKHGLNSK ALACLRTAET TLSTTQRLGY SFVMTCYAAL
301: GDNDGVMRLW EASKCVPGRI PAANYMTAIL CLIKVGDIDR AEWIFGSWEA VCRKHDVRVS NVLLGAYVRN GWIEKAEKLH LHMLEKGARP NYNTWEILME
401: GFVQSRQMDK AVNAMKKALS LMKSCHWRPP LKLVEAIAAF FEEQGNTDDA SRYIKLLQKF NLTSLPLYKS VLQAYIKADT VVPTNISEMI ARDDIVMDEE
501: MDHLIIRASK IDIRGDV
Best Arabidopsis Sequence Match ( AT5G27460.1 )
(BLAST)
001: MLIRCVAVAK TRFNTTGVVS RLVSSLADGS DTSSVANRNS LKEILRKNGP RRSVTSLLQE RIDSGHAVSL SELRLISKRL IRSNRYDLAL QMMEWMENQK
101: DIEFSVYDIA LRLDLIIKTH GLKQGEEYFE KLLHSSVSMR VAKSAYLPLL RAYVKNKMVK EAEALMEKLN GLGFLVTPHP FNEMMKLYEA SGQYEKVVMV
201: VSMMKGNKIP RNVLSYNLWM NACCEVSGVA AVETVYKEMV GDKSVEVGWS SLCTLANVYI KSGFDEKARL VLEDAEKMLN RSNRLGYFFL ITLYASLGNK
301: EGVVRLWEVS KSVCGRISCV NYICVLSSLV KTGDLEEAER VFSEWEAQCF NYDVRVSNVL LGAYVRNGEI RKAESLHGCV LERGGTPNYK TWEILMEGWV
401: KCENMEKAID AMHQVFVLMR RCHWRPSHNI VMAIAEYFEK EEKIEEATAY VRDLHRLGLA SLPLYRLLLR MHEHAKRPAY DIYEMMKLDK L
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g27460 [Source:UniProtKB/Swiss-Prot;Acc:Q3E911]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.