CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH08874
KRH35244
KRH38387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	KRH08874	AT4G25660.1	21798944
AT3G50110.1	KRH35244	AT4G25660.1	21798944
AT3G50110.1	KRH38387	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77047	Soybean	nucleus, plastid	93.58	93.73
VIT_07s0031g00020.t01	Wine grape	cytosol	52.39	65.7
Solyc02g093000.2.1	Tomato	cytosol	48.27	64.68
GSMUA_Achr10P...	Banana	cytosol	59.14	60.64
GSMUA_Achr7P21640_001	Banana	cytosol	58.32	60.31
PGSC0003DMT400064308	Potato	cytosol, plastid	59.64	60.13
CDY02094	Canola	cytosol	52.88	57.02
KRH35761	Soybean	nucleus	58.32	56.91
CDY23021	Canola	cytosol	54.2	56.63
KRG90993	Soybean	cytosol	57.66	56.18
Bra012908.1-P	Field mustard	cytosol	51.57	55.99
AT3G50110.1	Thale cress	cytosol	57.99	55.7
GSMUA_Achr5P07740_001	Banana	cytosol	52.22	54.19
OQU88311	Sorghum	cytosol	57.33	53.7
TraesCS5D01G117900.1	Wheat	cytosol	57.33	53.29
TraesCS5B01G115500.1	Wheat	cytosol	57.33	53.21
HORVU5Hr1G031300.2	Barley	cytosol	57.17	53.06
Os12t0407500-01	Rice	plasma membrane	57.5	53.04
TraesCS5A01G116100.1	Wheat	cytosol	56.67	52.68
Os12t0407200-01	Rice	cytosol, extracellular	9.23	50.0
Zm00001d007942_P002	Maize	cytosol	56.84	48.12
KRH44965	Soybean	cytosol	13.67	19.9

Protein Annotations

EntrezGene:100807702	MapMan:18.4.23.2.1	Gene3D:3.90.190.10	EMBL:ACUP02006750	EnsemblPlantsGene:GLYMA_11G052700	GO:GO:0003674
GO:GO:0003824	GO:GO:0004725	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	UniProt:I1LHA8	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	EnsemblPlants:KRH28426	ProteinID:KRH28426	ProteinID:KRH28426.1	ScanProsite:PS00383
PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326
SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI000233CFDB	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:3963654..3971584

Molecular Weight (calculated)

67061.5 Da

IEP (calculated)

6.384

GRAVY (calculated)

-0.529

Length

607 amino acids

Sequence
(BLAST)

001: MEPASADSSS QPTPPASNTE DRHSTKASGQ TGNAHDSQLS SPTSGISSWA RNLKFPQALG LGGAQQNSQA QNAGMSAFAR LTGGLGLQTL SNETAPVKSG
101: TEQSNLLESV TKGLVDSSKS AVKAVQVKAR HIVSQNKRRY QEDGFDLDMT YITENIIAMG FPGGDFSSGI FGYIEGFYRN HMDEVIKFFE THHKGKYKVY
201: NLCSERLYDG SLFQGKVATF PFSDHNCPPI QLIASFCQSA YSWLKEDIQN VVVVHCKAGM GRTGLMICSL LLFLKFFPTA EEAIDYFNHK RCVDGKALIL
301: PSQIRYVKYF ERTLTHFNGE VQPGRRCMLR GFRLHECPYW VRPSITISDH KGILFTTRKH PKTKDLMPED FWISAPKKGI VVFALPGEPG LTELVGDFKI
401: QFQDRQGDFY CWMNTTLTEN RKILDGSDFD GFDKRKIPAP GFKVEIVMIG YNAILPANTK SNPASKGSDG NTSNALPGLK HTTSNSSESE VPRNGDDDVF
501: SDSDEEETRD TQSTKAATEY KFMAPHQVSE TTTDHVGMLT HKTDQLSLQQ EERKQNVASE ESDTDKLHKN HTGNNSINMG SVGASDIKAI AADASVFSFG
601: DEDFESD

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.