Factsheet for Os12t0407500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0107000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50110.1	Os06t0107000-01	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88311	Sorghum	cytosol	84.19	85.49
TraesCS5D01G117900.1	Wheat	cytosol	84.19	84.84
HORVU5Hr1G031300.2	Barley	cytosol	84.04	84.56
TraesCS5B01G115500.1	Wheat	cytosol	83.89	84.4
TraesCS5A01G116100.1	Wheat	cytosol	83.13	83.77
Zm00001d007942_P002	Maize	cytosol	82.52	75.73
GSMUA_Achr10P...	Banana	cytosol	66.41	73.82
GSMUA_Achr7P21640_001	Banana	cytosol	63.07	70.7
VIT_03s0180g00020.t01	Wine grape	cytosol	63.68	69.03
VIT_07s0031g00020.t01	Wine grape	cytosol	49.85	67.77
Solyc02g093000.2.1	Tomato	cytosol	45.44	66.0
CDY46177	Canola	cytosol	59.12	65.93
CDX95448	Canola	cytosol	59.27	65.88
PGSC0003DMT400066563	Potato	cytosol, plastid	61.25	65.64
Bra038209.1-P	Field mustard	cytosol	58.81	65.59
Bra022420.1-P	Field mustard	cytosol	58.66	65.53
CDY50153	Canola	cytosol	58.81	65.48
CDY63391	Canola	cytosol	58.81	65.37
Solyc01g107750.2.1	Tomato	plastid	61.4	65.27
Os12t0407200-01	Rice	cytosol, extracellular	11.09	65.18
Bra022421.1-P	Field mustard	cytosol	59.57	65.12
AT3G19420.1	Thale cress	cytosol	59.57	64.16
KRH35761	Soybean	nucleus	60.64	64.15
KRG90993	Soybean	cytosol	60.64	64.04
PGSC0003DMT400064308	Potato	cytosol, plastid	55.47	60.63
CDY22969	Canola	cytosol, mitochondrion	12.46	59.42
KRH77047	Soybean	nucleus, plastid	53.65	58.25
CDY23021	Canola	cytosol	51.37	58.18
Bra012908.1-P	Field mustard	cytosol	49.24	57.96
KRH28426	Soybean	cytosol, plastid	53.04	57.5
CDY02094	Canola	cytosol	48.48	56.66
AT3G50110.1	Thale cress	cytosol	53.04	55.22
CDY65163	Canola	plastid	30.7	50.5

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	EntrezGene:4352052	ProteinID:ABA97561.1	EMBL:AK100320
ProteinID:BAF29653.1	ProteinID:BAT16842.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538
GO:GO:0035335	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	EnsemblPlantsGene:Os12g0407500	EnsemblPlants:Os12t0407500-01
ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like
UniProt:Q2QT46	SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
InterPro:Tyr_Pase_AS	UniParc:UPI000068141C	RefSeq:XP_015619810.1	SEG:seg	:	:

Description

Protein phosphatase 130Tensin phosphatase, C2 domain domain containing protein. (Os12t0407500-01);Similar to PTEN-like protein. (Os12t0407500-02)

Coordinates

chr12:-:12321685..12330180

Molecular Weight (calculated)

71928.9 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.559

Length

658 amino acids

Sequence
(BLAST)

001: MEEQQVKPSD SHPPPATPVD SQDSTAPPVR TPDPVSQATS NDSATQFAST VHVAPSPAPV PNAVPIQDAA GREAQSSIFS TSGLSSWAKN LKIPQPSSGQ
101: ESPTGKNTFS RLTSGLGLRL SPKGPQQDES AEGSTTPTTA QSGVFGSFTK GIVDSSKNAV KAVQVKARHM VSQNKRRYQE GGFDLDMTYI TENIIAMGFP
201: AGDLSSGLFG YFEGFYRNHM EEVIRFFEMH HKGKYKVYNL CSERLYDASL FEGKVACFPF DDHNCPPIQL VISFCHSAYS WLKEDIENVV VVHCKAGKAR
301: TGLMISSLLL YLKFFPTAEE SIEYYNQKRC VDGKGLILPS QIRYVKYFER ILTYFNGENQ PPRRCMLRGF RLHRCPYWIR PSITVSNHNG VLFTTKKHPR
401: TKELMPEDFW FSAPKKGIMV FALPGEPGLT EVAGDFKIQF HDRQGDFYCW LNTTMMENRV TLNPTDLDDF DKRKLPSPGF QVEVVLVDYD GSQPPKPKPA
501: AASTDQKSEA DSSTGTVAKG NNASSAEVSN KESARNDKDD VFSDSEAEDG SSKGRREKVS RNVEGTTNAA KASETSSVQK EASAAASRIE KVSITSEQGS
601: ARTPDAAPLK SGVSSKSSST TAPPPPPAAA DSSMSEFKAI AADASVFSFG DEDDYESE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.