CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022420.1-P	Field mustard	cytosol	98.14	98.3
Bra022421.1-P	Field mustard	cytosol	99.66	97.67
CDY63391	Canola	cytosol	97.63	97.3
CDY50153	Canola	cytosol	89.66	89.51
CDX95448	Canola	cytosol	89.15	88.85
AT3G19420.1	Thale cress	cytosol	89.66	86.58
Solyc01g107750.2.1	Tomato	plastid	68.47	65.27
CDY22969	Canola	cytosol, mitochondrion	15.25	65.22
PGSC0003DMT400066563	Potato	cytosol, plastid	67.8	65.15
VIT_03s0180g00020.t01	Wine grape	cytosol	65.93	64.09
GSMUA_Achr7P21640_001	Banana	cytosol	63.39	63.71
GSMUA_Achr10P...	Banana	cytosol	63.9	63.68
KRG90993	Soybean	cytosol	65.59	62.12
KRH35761	Soybean	nucleus	65.42	62.06
Os12t0407500-01	Rice	plasma membrane	65.93	59.12
OQU88311	Sorghum	cytosol	64.58	58.8
TraesCS5D01G117900.1	Wheat	cytosol	64.75	58.5
TraesCS5B01G115500.1	Wheat	cytosol	64.58	58.26
HORVU5Hr1G031300.2	Barley	cytosol	64.58	58.26
TraesCS5A01G116100.1	Wheat	cytosol	64.07	57.89
CDY65163	Canola	plastid	38.47	56.75
Os12t0407200-01	Rice	cytosol, extracellular	10.51	55.36
CDY23021	Canola	cytosol	53.73	54.56
CDY02094	Canola	cytosol	51.36	53.82
GSMUA_Achr5P07740_001	Banana	cytosol	53.05	53.5
Zm00001d007942_P002	Maize	cytosol	64.58	53.14
CDY24016	Canola	extracellular	7.29	41.75
CDY70932	Canola	extracellular, golgi	9.15	24.66
CDX74467	Canola	cytosol, mitochondrion, nucleus, plastid	16.27	23.24
CDX67428	Canola	nucleus	15.76	22.36
CDY37003	Canola	nucleus	15.59	22.12
CDY37863	Canola	mitochondrion	16.61	20.08

Protein Annotations

MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	GO:A0A078I7W4	UniProt:A0A078I7W4	EnsemblPlants:CDY46177
ProteinID:CDY46177	ProteinID:CDY46177.1	InterPro:Dual-sp_phosphatase_cat-dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004725
GO:GO:0006464	GO:GO:0006470	GO:GO:0008138	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	EnsemblPlantsGene:GSBRNA2T00083372001	InterPro:IPR014020
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF00782	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182
PANTHER:PTHR12305	PANTHER:PTHR12305:SF57	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF52799	InterPro:Tensin_C2-dom
InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0004EDB226	SEG:seg	:	:

Description

BnaA05g20640DBnaA05g20640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7W4]

Coordinates

chrLK032652:-:171411..174815

Molecular Weight (calculated)

64410.6 Da

IEP (calculated)

5.548

GRAVY (calculated)

-0.449

Length

590 amino acids

Sequence
(BLAST)

001: MSSESQNLPA TVTPDAHPPP VAVEAGNDDS PKGVASKLSA SGISTWAKSL KVPQPFASTS DVDNSEKSAF AKFTSGLGLR LSPKSPQPDE TTDGASSSAQ
101: PGLFGAITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH KGKYKVYNLC
201: SERLYDVSLF EGKVASFPFD DHNCPPIHLI TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV DGKGLVLPSQ
301: IRYVKYFERI LTYFNGENQP GRKCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHLRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE LAGDFKIHFH
401: DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADIDS TIPPKPSSEP ASKAPEETSA ANSSPAEGVT PVPAPKKETQ NPDKDDVFSD
501: NEADSTGPNK TTSSVSSQTP EAKQSSDETS GLARATEKVS ISGNKGSSSS QPVQGTVSKA EATEKPTGSG VMAADASVFS FGDEDEFDSD

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.