Factsheet for VIT_03s0180g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g00020.t01	Wine grape	cytosol	58.65	73.55
PGSC0003DMT400066563	Potato	cytosol, plastid	72.32	71.5
KRH35761	Soybean	nucleus	72.98	71.22
KRG90993	Soybean	cytosol	72.49	70.63
Solyc01g107750.2.1	Tomato	plastid	71.99	70.6
GSMUA_Achr10P...	Banana	cytosol	68.2	69.93
GSMUA_Achr7P21640_001	Banana	cytosol	65.9	68.14
CDY63391	Canola	cytosol	64.42	66.05
CDY46177	Canola	cytosol	64.09	65.93
CDX95448	Canola	cytosol	63.92	65.54
Bra022420.1-P	Field mustard	cytosol	63.59	65.53
CDY50153	Canola	cytosol	63.59	65.31
Bra038209.1-P	Field mustard	cytosol	63.43	65.25
OQU88311	Sorghum	cytosol	69.52	65.12
Bra022421.1-P	Field mustard	cytosol	64.58	65.12
AT3G19420.1	Thale cress	cytosol	65.24	64.81
Os12t0407500-01	Rice	plasma membrane	69.03	63.68
TraesCS5D01G117900.1	Wheat	cytosol	67.38	62.63
HORVU5Hr1G031300.2	Barley	cytosol	67.05	62.23
TraesCS5B01G115500.1	Wheat	cytosol	67.05	62.23
TraesCS5A01G116100.1	Wheat	cytosol	66.72	62.02
GSMUA_Achr5P07740_001	Banana	cytosol	55.35	57.44
CDY22969	Canola	cytosol, mitochondrion	13.01	57.25
Zm00001d007942_P002	Maize	cytosol	67.38	57.04
Os12t0407200-01	Rice	cytosol, extracellular	10.38	56.25
CDY65163	Canola	plastid	32.29	49.0
VIT_14s0108g01410.t01	Wine grape	cytosol	13.51	38.32
VIT_01s0137g00100.t01	Wine grape	cytosol	6.1	18.05
VIT_14s0108g01400.t01	Wine grape	cytosol	2.14	7.83

Protein Annotations

EntrezGene:100246943	wikigene:100246943	MapMan:18.4.23.2.1	Gene3D:2.60.40.1110	Gene3D:3.90.190.10	EMBL:AM450518
ProteinID:CAN65366	ProteinID:CAN65366.1	ProteinID:CCB62360	ProteinID:CCB62360.1	UniProt:F6I5Z2	EMBL:FN596754
GO:GO:0003674	GO:GO:0003824	GO:GO:0004725	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006629	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0019538	GO:GO:0035335	GO:GO:0046856
GO:GO:0052866	GO:GO:0070300	InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	EntrezGene:LOC100246943
wikigene:LOC100246943	ScanProsite:PS00383	PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR12305	PANTHER:PTHR12305:SF57
InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326	SUPFAM:SSF49562	SUPFAM:SSF52799	TIGR:TC68661	InterPro:Tensin_C2-dom
InterPro:Tensin_phosphatase	InterPro:Tyr_Pase_AS	UniParc:UPI0001982DFE	ArrayExpress:VIT_03s0180g00020	EnsemblPlantsGene:VIT_03s0180g00020	EnsemblPlants:VIT_03s0180g00020.t01
unigene:Vvi.11899	RefSeq:XP_002285306	RefSeq:XP_002285306.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:5941848..5961872

Molecular Weight (calculated)

66325.6 Da

IEP (calculated)

5.923

GRAVY (calculated)

-0.513

Length

607 amino acids

Sequence
(BLAST)

001: MELESADSSN LPPPKAPEVQ PSVATGSGPD NAARDAPSRL SSWAKNLKIP QSLAGGQDES PTGTTAKSSF ARFTSGIGLR LSPKTPTSED GPDGSPTTAQ
101: PGLFGTFTKG IVDSSRNAVK AVQVKARHVV SQNKRRYQEG GFDLDMTYIT ENIIAMGFPA GDMSSGFLGY VEGFYRNHME EVIKFFETHH KDKYKVYNLC
201: SERLYDASLF EGKVASFPFD DHNCPPIQLI TLFCQSAYSW LKEDIENVVV VHCKAGMART GLMISSLLLF LKFFPTAEES IDYYNQKRCF DGKGLVLPSQ
301: IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITVSDHNGV LFSTKKHPRT KDLSPEEFWF SAPKKGIMVF ALPGEPGLTP LAGDFKIHFH
401: DRQGDFYCWL NTTMMENRKV LNPDDLDGFD KRKLPSPGFQ VEVVLIDHDG SVPPAPKTET DVKKSDGVSG TGSASVDGAN ATPNPSKDPG SKDKDDVFSD
501: GEVEESGSSK SRQAQAAEGS VAAKTSSSET KTSPDQIASI THKTEQVSLG ASGTTPIHDA GKPKSDAVGG VTSGLEVPNP ERVSEFKAMA ADASVFTFGD
601: DEDYESE

Best Arabidopsis Sequence Match ( AT3G19420.1 )
(BLAST)

001: MSSESPNLPA AAGTVPDNHP PPPPVVTAAE AGSDDSPKGV ASKLSAAGIS NWAKNLKVPQ PFASTQNDSG VENTEKSAFA KFTSGLGIRL SPKSPQTNDT
101: TTEGTSSATE SSFIGTITKG LVDTSKNAVK AVQVKARHAV SQNKRRYQEG GFDLDLTYIT ENIIAMGFPA GDMSSGFFGY VEGFYRNQME EVINFLETQH
201: KGKYKVYNLC SERLYDVSLF EGKVASFPFD DHNCPPIHLV TSFCQSAYSW LKEDIENVVV VHCKAGMART GLMICSLLLY LKFFPTAEEC MDFYNQKRCV
301: DGKGLVLPSQ IRYVKYFERI LTYFNGENQP GRRCMLRGFR LHRCPYWIRP SITISDHNGV LFTTKKHPRT KDLSPEDFWF SAPKKGVMVF ALPGEPGLTE
401: LAGDFKIQFH DRQGDFYCWL NTTMMENRVI LKTSELDGFD KRKLPSPGFM VEVVLADINA TIPTNPSSET ASKTPEETSA ANSSPVDGSA SVPGPDKETE
501: NPDKDDVFSD NEGDSTGPTK TTSSASSQTP EAKKSADETA VLTKATEKVS ISGNKGSSQP VQGVTVSKGE ATEKPSGAGV NASSSSESEF KVMAADASVF
601: SFGDEDDFES D

Arabidopsis Description

PTEN2APTEN2A [Source:UniProtKB/TrEMBL;Acc:A0A178V9M6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.